Proteus appendicitidis: QQS39_01720
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Entry
QQS39_01720 CDS
T09947
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
papp
Proteus appendicitidis
Pathway
papp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQS39_01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
papp03019
]
QQS39_01720
03009 Ribosome biogenesis [BR:
papp03009
]
QQS39_01720
Enzymes [BR:
papp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQS39_01720
Messenger RNA biogenesis [BR:
papp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQS39_01720
Ribosome biogenesis [BR:
papp03009
]
Prokaryotic type
rRNA helicases
QQS39_01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
WIV88753
UniProt:
A0ABY8Y960
LinkDB
All DBs
Position
336381..338279
Genome browser
AA seq
632 aa
AA seq
DB search
MTTETDMTFADLGLSAPILTALNDLGYEKPSPIQQQCIPFLLNGNDVLGMAQTGSGKTAA
FSLPLLHNLDESLKAPQILVLAPTRELAVQVAEAIEDFSKHLPKVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLNRGTLDLSKLKGLVLDEADEMLRMGFIEDVENILSKIPA
EHQTALFSATMPEAIRRITRRFMNDPKEVRIQSSVTTRPDISQSYWMTFGARKNEALIRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQSLREQTLERLKNGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKMTIPEVELPNAELISQRRQEKFAQQIAQQLETSNLDQYRALLPKLAPQGEEALD
METLAAVLLKMAQGERALILPPDPVRRPRREFNDRDDRRGDDRRRGDNDRERSPRRERRD
AGEMDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLYGSHSTIELPKGMPTDLL
SHFTRTRIMNKPLNMQLVGDAQSQPFRERRNNSRRDGQPQGGRRFNNGDQPQRRGNNDRG
GERSNDRGGERGNFRGRNNEGTPRRRSSSHNQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaaccgatatgacttttgctgatctaggtttatcagcacctattttgact
gcactgaatgacttaggctacgagaagccttctccaattcagcaacaatgtattcctttc
cttttaaacggcaatgacgttttaggtatggcacaaacaggtagtggtaaaactgccgca
tttagcctgccattattacataatcttgatgaatcattaaaagcaccacaaattttagtt
ttagcacctactcgtgaacttgcggttcaggttgctgaagctattgaagatttttctaag
catttaccaaaagtaaatgttgttgcactgtatggtggtcagcgttacgacgttcaatta
cgtgctttacgtcaaggtccacaagttgttgtgggtacaccaggtcgtttattagaccat
ttaaaccgtggcacattagatttatctaaactgaaaggcttagtattagatgaagctgat
gaaatgttacgtatgggctttattgaagatgttgaaaacattttaagtaagatcccagca
gaacaccaaacggcactgttctctgcaacaatgccagaagctattcgtcgtattactcgt
cgttttatgaacgatccgaaagaagtacgtattcaaagtagcgtaacaacacgtccagac
attagccaaagctattggatgacatttggcgcacgtaaaaacgaagcgttaattcgtttc
ttagaagctgaagattttgatgcggcaattattttcgttcgtactaaaaatgcaacatta
gaagttgctgaagctttagaacgtaatggttataacagcgcagcgttaaacggtgatatg
aaccaatcactgcgtgagcaaacattagagcgtctgaaaaatggtcgtttagacatttta
atcgcgactgacgttgctgctcgtggtcttgacgttgaccgtatcagcctggttgtgaac
tatgatatcccaatggattcagaatcttacgttcaccgtattggtcgtacaggccgtgcg
ggccgtgcgggtcgtgcaattttattcgttgataaccgtgagcgtcgtttactgcgcaat
atcgaacgtacaatgaagatgactattcctgaagtagaactgccaaatgcagagcttatc
agccaacgtcgtcaggaaaaatttgcacagcaaatcgcacaacaattagaaacaagcaac
cttgaccaatatcgcgctctattaccaaaacttgctccacaaggtgaagaagcgttagac
atggaaacactggctgcggtattactgaaaatggctcaaggtgagcgtgcgcttattctg
ccaccagatccagttcgtcgccctcgtcgcgaatttaacgatcgtgacgatcgtcgtggt
gatgatcgccgtcgcggtgataacgatcgcgagcgttctcctcgtcgtgaacgtcgtgat
gctggcgaaatggatttataccgtatcgaagtgggtcgtgatgatggtgttgaagtacgt
catatcgttggtgcgattgctaacgaaggcgatatcagcagccgttacattggtaatatc
aaactgtatggttctcactcaaccatcgaattaccaaaaggtatgccaacagatttatta
agccatttcacgcgtacgcgtattatgaacaaaccactgaatatgcaattagtgggtgat
gctcaatctcagcctttccgtgagcgtcgtaataacagccgtcgtgatggtcagccacaa
ggtggccgccgctttaacaatggtgatcaaccacaacgtcgtggtaataacgaccgcggt
ggtgagcgtagcaacgatcgtggtggcgagcgcggtaacttccgtggtcgtaacaacgaa
ggtacacctcgtcgtcgtagcagctctcataaccaataa
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