Proteus appendicitidis: QQS39_05815
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Entry
QQS39_05815 CDS
T09947
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
papp
Proteus appendicitidis
Pathway
papp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQS39_05815 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
papp03019
]
QQS39_05815 (rhlE)
Enzymes [BR:
papp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQS39_05815 (rhlE)
Messenger RNA biogenesis [BR:
papp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQS39_05815 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
HI1480
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIV89519
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All DBs
Position
1259880..1261304
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AA seq
474 aa
AA seq
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MTDFTSLGLSEALLRAIDEQGYKTPTPIQQQAIEPILAGKDVLASAQTGTGKTAAFTLPI
LEKLSQSAVKTKGRQPVKALILTPTRELAAQIAENVKAYSRYIPIRSLVVFGGVSINPQM
MKLRGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVISKLPK
KRQNLLFSATFSKEITGLANSLLNNPVSISVAPKNSAAESVDQYVHLVDKKRKTELLSHL
IGLENWPQVLIFTRTKHGANKLAEHLNADGIKSAAIHGNKSQGARTRALADFKDGKLKAL
VATDIAARGLDIDQLPYVVNFELPQVAEDYVHRIGRTGRAAATGKAISLVCVDEHGLLAD
IERLLKREIPRLALEGYDPDPSIKAAPLHKKPKNNAPRRSGGNHGRADIRGKDNRNNSRR
DGDSEGKESGRNKNKENYRNKDGSRTGKLGPRRSRKSDEDSDNQSPWSKARKEF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattttacatcgcttggtttaagtgaggcgcttctccgcgctattgatgaacaa
gggtataaaaccccaacccctattcaacagcaggcgattgagccgattttggcgggtaaa
gacgtattagcaagtgcgcaaacaggcacaggtaaaacagcagcttttacattaccaata
ttggaaaagttatctcaatcagcagtaaaaacaaaaggtcgccaacctgttaaagcgctg
attttgacaccaacgcgcgagcttgcggctcaaattgctgaaaacgtaaaagcgtatagc
cgttatattcctattcgttcgttagtcgtgtttggtggtgtgagcattaacccacaaatg
atgaagttacgtggcggtgttgatgtactgattgcaacaccgggacgtttactcgatctt
gaacatcaaaatgcagttgatctttctcgcgttgaagttttagtgcttgatgaagctgat
cgtatgttagatatgggctttatccacgatattcgccgagtgattagcaaattaccgaaa
aaacgtcaaaacttactgttttcagcgacgttttctaaagagatcacagggcttgccaat
tcactcttaaataacccagtgagcatttcggttgcaccaaaaaactcggctgctgaatct
gttgatcaatatgttcatttagtggataaaaaacgtaaaacagagttgttatcacactta
attggtttagaaaattggccacaagtgcttatttttacgcgtactaaacacggcgcgaat
aagcttgctgaacatttaaatgcagatggaattaaatcggctgctattcacggtaataaa
agccaaggtgcaagaacgcgcgctttagctgactttaaagatggcaaattaaaagcgtta
gtcgcaacagatattgcggctcgtggtcttgatatcgaccaactgccttatgtggtcaat
tttgaattaccgcaagtggcagaagattatgttcaccgtattggtagaaccggtcgtgca
gctgcaacgggtaaggctatttcgcttgtttgtgttgatgaacatggtttattagcggat
attgaacgtttattaaaacgcgaaattccacgtttagcattagaaggttacgatcctgat
ccttcaattaaagcagcacctttacataaaaaaccaaagaataatgccccgcgtagaagt
ggtggtaatcatggtcgtgcagatattcgtggtaaagacaatcgcaataatagtcgtaga
gacggtgatagcgaaggtaaagagtctggacgtaataaaaataaagaaaactaccgtaac
aaagatggctctcgtaccggaaaattagggcctcgtcgttcacgtaaaagtgatgaagat
agtgataatcaaagcccttggtcaaaagctagaaaagagttttga
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