Proteus appendicitidis: QQS39_06900
Help
Entry
QQS39_06900 CDS
T09947
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
papp
Proteus appendicitidis
Pathway
papp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QQS39_06900 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
papp03400
]
QQS39_06900 (sbcB)
Enzymes [BR:
papp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
QQS39_06900 (sbcB)
DNA repair and recombination proteins [BR:
papp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QQS39_06900 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQS39_06900 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QQS39_06900 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WIV89726
UniProt:
A0ABY8YCA9
LinkDB
All DBs
Position
complement(1508999..1510429)
Genome browser
AA seq
476 aa
AA seq
DB search
MSNSAKTPTFYIHDYETFGTHPALDRPAQFAGVRTDMDFNIIEDPLVIYCKPNDDYLPHP
EAVMITGITPQIAAKNGMIEAEFTRQIHQAFSQPNSCIMGYNNLRFDDEVTRNILYRNFY
DPYAYSWQKGNSRWDLLDVLRACYALRPEGIIWPENEDGFPSFRLELLTKANGISHENAH
DAMSDVYATIAMAKKLKQAQPRMFDYFFNLRDKRKVQALIDIPAMTPIVHVSGMFGAARS
NLSLVAPLAWHPDNRNAVIVCDLAADISPLLTLDSDQLRERLYTPRSELSVEEPPVPLKL
LHINKCPIVAPQNTLRQQDADRIGLDVETCLKNQAILFSHPEIRNKVVEIFAQQTPFVVS
DNVDSQIYNGFFSENDRSAMEIIRSTQPQNLPALDLTFEDARMEPLFFRYRARNYPSTLN
YDEQQRWLTHRKEMLTPEKLTEYINTIQLLAEEYADNEEKLKQLQELYLYAQEIAS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaattcagcgaaaacgcccacattttacattcatgactacgaaacttttggtact
caccctgcgctcgatcgccctgcacaatttgcgggtgtaagaacagatatggatttcaat
attattgaagatcctctcgtgatttattgcaagcctaatgatgattatctgcctcatcca
gaagccgtgatgatcacaggaataacgccacaaatagcggcaaaaaatgggatgattgaa
gctgaatttactcgtcaaattcatcaagcttttagccaacctaatagttgtattatgggc
tataacaacctgcgatttgatgatgaagtcactcgcaatatcctttatcgtaatttttat
gatccttatgcttatagctggcaaaaaggaaattcgcgttgggatttacttgatgtttta
cgtgcctgttacgcactgcgccctgaaggtattatttggcctgaaaatgaagacggtttt
ccaagtttccgtttagagttattaaccaaagcaaatggtatttctcatgagaatgcacat
gatgcaatgtctgatgtttatgccaccattgcgatggcaaaaaaattaaagcaagcgcaa
ccacgtatgtttgattatttctttaatttacgtgataaacgcaaagtgcaggcgctaatt
gatattccggcaatgacaccaattgtgcatgtttcaggtatgtttggtgccgcacgttct
aatttaagccttgttgcaccattagcgtggcatcctgataatcgcaatgcagttattgtt
tgcgacttagccgccgatatatcccctttattaacactcgactcagatcaattgcgtgag
cgtttatatacgccacgtagtgaactatccgttgaggagccaccagttccacttaaatta
ctgcatattaataaatgccctattgtggcaccgcaaaatacattaagacaacaagatgca
gatagaattggtttagatgttgagacttgtttaaagaatcaggcaatcttgttttctcat
cctgaaatacgcaataaagtcgtggaaatatttgcgcaacaaacgccttttgttgtatct
gataacgttgattcacaaatttataatggttttttcagtgaaaatgatcgtagtgcgatg
gagattattcgctcaacacaaccacagaatttacccgcgttagatttaacgtttgaagat
gcgagaatggaacctctgtttttccgttatcgtgcaagaaattatccttcaacgttgaat
tatgacgaacaacaacgttggttgacgcatagaaaagagatgttaacgccagaaaaatta
accgaatatattaatactattcagttattagctgaagaatatgctgataatgaagaaaaa
ttaaagcagctacaagagctttatttatatgctcaagagatagcgagctaa
DBGET
integrated database retrieval system