Proteus appendicitidis: QQS39_08660
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Entry
QQS39_08660 CDS
T09947
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
papp
Proteus appendicitidis
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
papp03016
]
QQS39_08660
Enzymes [BR:
papp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QQS39_08660
Transfer RNA biogenesis [BR:
papp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QQS39_08660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
WIV90058
LinkDB
All DBs
Position
complement(1841756..1843702)
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AA seq
648 aa
AA seq
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MFQDNPLLAQLKQQLHAQTPRVEGLVKGTDKGFGFLEVDGQKSYFIPPPQMKKVMHGDRV
IAAVHTNGDKESVEPEELVEPFLTRFVGRIQKKEGDNRLWIIPDHPLLKDAIPCRPAQGL
THSFVDQDWAVAVMRRHPLNKGDKGFQAEITDYITDKDDHFAPWWVTLMRHQLERDAPEM
SDEALTLHDTLPREDLTSLSFVTIDSASTEDMDDALFIRKEENGQLTLFIAIADPTAYIL
PNSELDKIAAQRALTNYLPGFNIPMLPRELSDNICSLRPNEKRPALVCQVNITEDGALLE
DIHFYSAWVESKAKLVYDNISDWLESENAQWQPENEMVHEQVMLLKEMCEKRHEWREKHA
LVFKERPDYRFILDEGGNVLDIVAEKRRIANRIVEEAMITANICAAKVLAKNLGFGVYNV
HTGFDPLYIDQVVQTLKDNGIETTSESLLTLEGFCQLRRELDNQPNQFLDSRIRRFQNFA
EIKAEPGPHFGLGLEAYATWTSPIRKYSDILNHRLLKAIISKESAEKPQEEDGIRIAERR
RANRMAERDVGDWLYARFLKPFAGTETPFNAEIIDITRGGVRVRLVENGAVAFIPAPFLH
AVRDEIQCSQETGTVIVKGETAYKLNDIIPVRIEDVKLETRNIVARPI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccgctgcttgcacagctaaaacagcaactccatgcccagacaccg
cgcgtggaaggccttgtaaagggaacagataaaggctttggcttccttgaagttgatggt
cagaaaagctattttattccccctccgcaaatgaaaaaagtgatgcacggcgaccgagtt
attgctgccgttcatacaaacggtgataaagaatcggttgaacctgaagaactagtcgaa
cctttcttaacacgttttgtcggtcgtattcagaaaaaagaaggtgacaaccgtctgtgg
ataatcccagatcacccgcttttaaaagacgccattccttgccgcccagctcaaggctta
acacatagctttgttgatcaagattgggctgttgccgttatgcgtcgtcatccactgaat
aaaggtgataaaggttttcaggctgaaattacagactatattaccgataaagacgatcac
tttgcgccttggtgggtaaccttaatgcgtcatcagcttgaacgtgatgcacctgaaatg
agtgacgaagcgctcacactacatgacactttacctcgtgaagatctgacttctctctcc
tttgtcactattgatagtgcttcaacagaagatatggatgacgccctctttattcgtaaa
gaagagaacggtcaactcacactctttatcgctattgcagatccaaccgcttatattctg
cctaacagtgaattagataaaattgccgcacaacgtgcgctaactaactatctgccaggc
tttaatatcccaatgttgcctcgcgaactatcagacaatatttgctcattacgccctaat
gagaaacgtcctgcattagtttgccaagttaacatcactgaagatggcgctctgcttgaa
gatattcatttctactctgcatgggtagaatcaaaagctaaactggtttatgacaacatt
tcagattggttagaaagtgaaaacgcccaatggcaacctgaaaatgaaatggttcatgag
caagtgatgttattaaaagagatgtgtgaaaaacgtcatgaatggcgtgaaaaacatgct
ctggtctttaaagaacgccctgattaccgttttattcttgatgaaggcggcaatgtttta
gatatcgttgcggaaaaacgccgtatcgcaaaccgcattgttgaagaagcaatgatcacc
gccaatatctgtgcggcaaaagtgctggcgaaaaacttaggttttggcgtttacaacgtt
catacaggctttgatccactttatatcgatcaagttgtacagactttaaaagataacgga
attgaaactacgtctgaaagtttattaacgcttgaaggtttctgccaattgcgtcgcgag
cttgataatcagccaaatcagttccttgatagccgtattcgccgcttccagaactttgct
gaaatcaaagcagagcctggtcctcactttggtttaggattagaagcttacgcaacatgg
acttcacctattcgtaagtacagtgatattttaaatcaccgtttgctcaaagcgattatc
agtaaagaaagtgctgaaaaaccacaagaagaagatggcattcgtattgcagagcgtcgc
cgtgctaaccgtatggcagagcgtgatgtaggtgattggttatatgcacgtttcttaaaa
ccttttgctggcactgaaacaccatttaatgcagaaattatcgatattacgcgtggtggt
gttcgtgttcgtttagttgaaaacggtgctgttgcctttattcctgcaccattcttacat
gctgtacgtgatgaaattcaatgtagccaagaaacaggcaccgtcattgtaaaaggcgaa
actgcttataagctcaatgatatcattcctgtacgcattgaagatgtaaaactagaaaca
cgtaatatcgttgctcgccctatctaa
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