Proteus appendicitidis: QQS39_13235
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Entry
QQS39_13235 CDS
T09947
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
papp
Proteus appendicitidis
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
papp03009
]
QQS39_13235 (srmB)
Enzymes [BR:
papp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQS39_13235 (srmB)
Ribosome biogenesis [BR:
papp03009
]
Prokaryotic type
rRNA helicases
QQS39_13235 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Cas3-like_C_2
AAA_22
AAA_11
CMS1
Motif
Other DBs
NCBI-ProteinID:
WIV87423
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All DBs
Position
2808938..2810302
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AA seq
454 aa
AA seq
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MTATTFSSLELDESLLTALEEKGYQRPTAIQADAIPAAMDGRDILGSAPTGTGKTAAFLL
PAIQHLLDYPRKKSGPPRILILTPTRELAMQVAEQAKELCAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEMLILDEADRMLDMGFANDIETIAGETRW
RKQTLLFSATLEGNAVIDFAQRILNEPVELNADPSRRERKKIQQFYYHADNLEHKTALLA
ALLKQDDVKKSIVFVRKRERVRELVTALEKEGIKCSYLEGEMAQTQRNDAIKRLESGKMN
VLVATDVASRGLDLDDITHVFNFDLPRTADVYLHRIGRTGRAGRKGIAISLVEAHDHPLL
GKIGRYVQEPIKYRVVAELRPETKAPSLKATFKPSKKVLAKRKAKKEEEKKAVKEKVRTR
DRKNIGKRRKAVAEHTEKKIAPTAPAKEANTDNE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgacattttccagtcttgaacttgatgaaagtttattgaccgcattagaa
gaaaaaggatatcaacgtcctactgctattcaagcagatgccattcctgctgcaatggat
ggacgcgatattttaggctctgcgccaacaggcacagggaaaactgcggcctttttgctt
ccggcaattcaacacttgcttgattatccacgtaaaaaatcaggcccaccacgtattctt
atcctgactccaacacgcgaacttgccatgcaagttgccgaacaagctaaagagttatgt
gcgcacacacatttagatatcgccacaatcacgggcggtgttgcttatatgaatcacgct
gaagtcttcagcgaaaaccaagacatcgttgtcgcaacaacaggtcgtttattacagtac
atcaaagaagaaaactttgactgtcgtgcagtagaaatgctgattttagatgaagcagat
cgcatgttagatatgggtttcgctaacgatatcgaaactattgcaggcgaaactcgctgg
cgcaaacagacattactgttttctgcaacactggaaggtaatgcggttattgattttgca
cagcgcatcctcaacgaacctgttgagcttaatgccgatccttctcgccgtgaacgtaaa
aaaattcagcagttctattatcatgctgataatcttgaacataaaacagcgttactggct
gcattactgaaacaagacgatgttaaaaaatcgattgtctttgttcgtaaaagagagcgt
gtaagagagcttgtcaccgcgttagaaaaagaaggtattaaatgtagctaccttgaaggt
gaaatggcgcaaacacagcgtaacgatgcgatcaagcgtttagaatccggcaaaatgaat
gtgcttgttgccacagatgttgcttctcgtggtcttgatcttgatgacatcacacacgtt
ttcaactttgacttgcctcgtactgcggatgtttacttgcatcgtattggtcgtacagga
cgcgcgggccgtaaaggtatcgccatttcattagttgaagctcacgatcacccattatta
gggaaaattggccgttacgttcaagagccaattaaatatcgtgttgttgcagaactacgt
cccgaaaccaaagcacctagcctgaaagcaacattcaaaccttctaaaaaagtgcttgct
aaacgtaaagcaaaaaaagaagaagagaaaaaagcagttaaagaaaaagtgcggactcgc
gatcgtaaaaatattggtaaacgtcgcaaagcagttgctgagcatacagaaaaaaagatt
gcacctactgcaccagctaaagaagcgaatactgataacgaataa
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