Proteus appendicitidis: QQS39_14860
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Entry
QQS39_14860 CDS
T09947
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
papp
Proteus appendicitidis
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
papp03016
]
QQS39_14860 (truD)
Enzymes [BR:
papp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
QQS39_14860 (truD)
Transfer RNA biogenesis [BR:
papp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QQS39_14860 (truD)
Prokaryotic type
QQS39_14860 (truD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
WIV87730
LinkDB
All DBs
Position
complement(3220081..3221133)
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AA seq
350 aa
AA seq
DB search
MSDLPELHWLHGKPQATGLLKSIPEDFIVCEDLGFTLDGEGEHVMVKIRKTGCNTAFVAE
KLAKFVGIHPRDASYAGLKDRNAVTEQWFCLRMPGKEMPDFSQLVLEGCEILETTRQQRK
LRIGTLKGNHFTLVLREISDRDFVDTRLAQIKAKGIPNYFGAQRFGRNGDNLRQAMRWAT
DEIRVKERGKRSFYLSAARSAMFNHIVSKRLENDLYSKVILGDAMQLHGRGSWFVVDEAE
LAPTQTRYEEHDVHITAPLPGKGDLGTQSQALDFETKNLAEYDAFWSLARQERVDNARRA
INVLPENMSWDWVDDTTVSLSFFLPAGSFATSVVRELILLGKDDAENIGE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttacctgaactccattggttacatggaaaaccacaagcaacaggcttacta
aagtcaattcctgaagattttattgtctgtgaagatcttggcttcacccttgatggtgaa
ggcgagcatgtcatggtgaaaatcagaaaaacaggttgtaacacggcttttgtggctgaa
aaattggcaaaatttgttgggatccatcctcgtgatgccagttatgccggactaaaagac
agaaatgccgttactgaacaatggttttgcctgcgaatgccgggtaaagagatgcccgat
tttagtcagcttgttttagaaggttgcgaaattctagaaacgactcgccagcaacgtaaa
ttacgtataggaacgctaaaaggtaatcactttacattggtgttacgagaaatttctgat
cgcgattttgttgatactcgattagcgcaaataaaagcaaaaggtattcctaactacttt
ggcgctcaacgatttggtcgtaatggtgataatttacgacaagccatgcgttgggcaacg
gacgaaatccgcgtaaaagaacgaggaaaacgtagcttttatttatcagcagcccgtagt
gcgatgtttaatcatatcgtcagtaaaagattggaaaatgatttatattcaaaagtgata
cttggtgatgcaatgcaacttcatggaagaggtagctggtttgttgttgatgaggccgaa
ttggctccaacacaaactcgctatgaagagcatgatgttcatattacggcacctttgccg
ggtaaaggtgatttaggtacacaatcacaagcattagattttgaaactaaaaatctggca
gaatatgacgctttctggtcgctggctcggcaagaacgagttgataatgcaagacgcgct
atcaatgtattacccgaaaatatgtcatgggattgggtagacgacaccactgtttctctg
tcattctttttacccgcaggaagctttgcaactagcgttgtacgtgaattaatcttatta
gggaaggatgatgctgaaaatattggtgagtaa
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