Proteus appendicitidis: QQS39_15035
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Entry
QQS39_15035 CDS
T09947
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
papp
Proteus appendicitidis
Pathway
papp03030
DNA replication
papp03430
Mismatch repair
papp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
papp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQS39_15035 (dnaE)
03430 Mismatch repair
QQS39_15035 (dnaE)
03440 Homologous recombination
QQS39_15035 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
papp03032
]
QQS39_15035 (dnaE)
03400 DNA repair and recombination proteins [BR:
papp03400
]
QQS39_15035 (dnaE)
Enzymes [BR:
papp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQS39_15035 (dnaE)
DNA replication proteins [BR:
papp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QQS39_15035 (dnaE)
DNA repair and recombination proteins [BR:
papp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QQS39_15035 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WIV87759
LinkDB
All DBs
Position
complement(3256210..3259692)
Genome browser
AA seq
1160 aa
AA seq
DB search
MADPRFIHLRVHSDYSMIDGLAKTGPLVKKVASLGMPAFAITDFTNLCGLVKFYGAAHGA
GIKPIIGADVYLETELLGDEYAHLTILARNNVGYQNLTLLISEAYKHGYGAVGPTIKQEW
LTTYKEGLLLLSGGRMGDVGKFLLRGNRALVDQCLEYYQTHFPDSYYLELIRTGRADEET
YLHEAVALASEKGLPVVATNDVCFLDSDDFDAHEIRVAIHDGFTLSDPKRPKNYSPQQYM
RTEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVKKSQEGL
EERLAFLFPDPEERQKRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYSLKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKSLIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKSLEPVDISAIPLTDQRSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGVEE
ISYPDVKWQHESLQPVLEPTYGVILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKNGVDGELAMRIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIVEARQQGGHFKDIFDLCARTETKKLNRRVMEKLIMSGAFDKLGPHRAALMS
SLEDALKAADQHAKAEAIGQSDMFGVLAEAPEQVERSYANIPKWSDQVVLEGERETLGLY
LTGHPITRYLKEIERYAAGTRLKDLVPTPRGQMVKVAGLVLASKVFTTKRGNRIGVCTLD
DRSGRLEIMLFSDALDKYQHLLEQDKILIATGQVSFDDFNGGLKMTVRELMDINEAREKY
ARGLAISLSDRQINEQLLNRLRGVLEPHRSGTIPVHLYFEKHDACARLRFGATWRVTPTD
MLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctcgttttatccatcttagggtacacagcgattattcaatgatcgatgga
ttggcaaaaacagggcctcttgtgaagaaagtggcttcgctgggaatgcctgcttttgcg
attactgatttcactaacttatgtgggttagtgaaattttatggtgctgcacatggtgct
ggcattaaacctatcattggtgctgatgtttaccttgaaactgaattattaggtgacgaa
tatgctcatctgactattcttgcccgtaataatgtaggctaccaaaacctcactttactg
atttcagaagcttataaacacggttatggtgctgttggcccgacaattaaacaagagtgg
ttaacaacctataaagaagggctattgttgctttctggcggcagaatgggggatgtgggt
aaatttctacttcgtggaaatcgcgctttagttgatcagtgccttgagtattaccaaact
cattttcccgatagttattatctagaacttattcgtaccggtcgtgctgatgaggaaact
tatcttcatgaagcagtcgctctggcttctgaaaaaggtttgcctgtcgttgcaaccaat
gatgtctgttttctcgacagtgatgattttgacgcacatgaaattcgtgtcgccattcat
gatggttttacgttatctgatcccaaacgccctaagaattatagccctcagcaatatatg
cgcacagaagaagaaatgtgtgaattatttgctgatatacctgaagcattagaaaacagt
gttgaaatcgctaaacgctgtaatgtcacgatccgtttaggggaatattttcttccacaa
ttcccaacaggggatatgagtacagaagatttccttgttaaaaaatcacaagaaggttta
gaagaacgtttagcctttttatttccagatcctgaagaacgacaaaaaagacgccctgaa
tatgatgaacgtcttgatatcgagctgaaagtaattaaccagatgggattccctggttac
ttccttatcgtgatggagtttattcagtggtctaaagataacggtgttcctgttggtccg
gggcgaggttctggtgcgggttcactagtagcttattcgctgaaaatcacagatcttgat
cctcttgaatttgacttacttttcgaacgttttcttaatcctgaacgtgtttcgatgcct
gactttgacgtcgatttctgtatggaaaaacgcgatagagttatcgaccacgttgctgaa
atgtatggacgggatgcagtatctcagatcattacatttggtacgatggcggcaaaagcc
gttattcgcgatgttggacgtgttttagggcacccttacggttttgttgatagaatttca
aaactcgttcctcctgatccggggatgacgctagaaaaagcgtttgcagcggaacctcaa
ttacccgaaatttatgaagccgacgaagaggttaaatctcttattgatatggctcgtaaa
ttggaaggggtaacacgtaatgcgggtaagcacgccggtggtgtcgttatttcaccaacg
aaaatcaccgattttgcgccactttattgtgatgcagagggaaataaccccgttacacaa
tttgataagaacgacgttgaatacgcaggtcttgttaaattcgacttcttaggtttaaga
acactaaccatcattaactgggcattagagatgattaatgcccgacgtgctaaaaaatca
ctcgaacctgttgatatttcggcgatcccattaacggatcagcgcagttttgacatgttg
cagcgttcagaaacaaccgcggtattccagttggaatctcgtggtatgaaagatctcatc
aaacgcctacgtcctgactgttttgaagatatgattgcacttgttgccctatttcgtccg
gggccattgcagtcaggcatggtagataactttattgaccgtaaacacggtgttgaagag
atttcatatcctgatgttaagtggcagcatgaaagtttacagccagttctagaaccaacc
tatggtgttatcctataccaagaacaagttatgcaaattgcacaggttcttgcgggatat
acgctaggtggcgcggatatgttacgacgcgcaatgggtaagaaaaaacctgaagaaatg
gcaaagcaacgctctgtttttgaagaaggtgctattaaaaacggtgtcgatggtgagctt
gctatgaggatctttgacttggtggagaaattcgccggttatggatttaacaaatcacac
tcagcagcgtatgcattagtttcttatcaaacattatggttgaaagcccactatccagct
gaatttatggctgctgtaatgacggcagatatggataacactgaaaaagtggtgggattg
gttgatgaatgttggagaatgggcttaaaggttcttcctcctgatattaatagcggtctt
tatcatttccacgtaaatgatgaaggtgaaatcgtttatggtattggtgccattaaaggt
gtgggtgaagggccgattgaagcgattgtagaggcgcgtcagcaaggcggtcattttaaa
gatatttttgatctctgtgctagaacagaaacgaaaaaattgaatcgccgagtgatggaa
aaactgataatgtcaggcgcattcgataagctagggcctcatcgtgctgctttaatgtct
tcattagaagatgcgttaaaagccgcagaccaacatgccaaggctgaagcaatagggcaa
tcggatatgtttggtgtgttagctgaagcacctgagcaagttgagcgttcttatgccaat
atacctaaatggtcagaccaagttgttttagaaggtgagcgagagacgctaggtttatat
ttaactggtcatccgatcacacgttatttaaaagaaattgaacgatatgcggcaggaaca
cgtctaaaagatttagtgccaacacctcgtggccaaatggtgaaggttgcaggcttagta
cttgcttctaaagtatttacaacgaaacgtggaaatcggatcggcgtttgtaccttagat
gatcgttcaggtcgcttagaaattatgttattttctgatgcattggataaataccaacat
ttattagaacaagacaagattttaattgctactgggcaggtcagctttgatgatttcaat
ggtgggcttaaaatgacagtccgcgaacttatggatatcaacgaagcccgtgaaaaatat
gcacgaggacttgctatctcattatcagacaggcaaattaatgagcaattattaaatcgt
cttcgcggcgttttagaacctcatcgttcaggcacgataccggttcatctttattttgaa
aagcatgatgcctgcgcacgtttacgatttggtgcgacttggcgtgtaacgccaacagat
atgcttttaacggatctgcgaactctgctgggtaatgagcaggtagaattagaatttgac
taa
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