Pantoea ananatis PA13: PAGR_g0004
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Entry
PAGR_g0004 CDS
T01970
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paq03032
]
PAGR_g0004
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g0004
Enzymes [BR:
paq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PAGR_g0004
DNA replication proteins [BR:
paq03032
]
Prokaryotic type
DNA Topoisomerases
PAGR_g0004
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAGR_g0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AER30545
LinkDB
All DBs
Position
3860..6268
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AA seq
802 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELTIRREGKVHQQIYLHGVPEAPLAVTGDTDATGTRIRFWPSHDTFTNVT
DFEYDILAKRLRELSFLNSGVSIRLEDKRDARNDHFHYEGGIRAFVEYLNKNKTPIHPTV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY
LLENPGDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMLQYQIAIALDGTSLHTTASAPALGGEPLETLVAEFNSTQKMIKRMERR
YPMAMLRALIYHDTLSDISNEAQVTSWINGLVSYLTAREAHGSTYLAQVRENREQNVFEP
VLRVRTHGVDTDYPLDAEFLQGGEYRKICALGGKLRGLLEEDAYIERGERRQPVSSFEQA
IDWLEKESRRGLSVQRYKGLGEMNPEQLWETTMDPDSRRMLRVTIKDAIAADQLFTTLMG
DAVEPRRAFIEENALKAANIDI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcttcaagtatcaaagtcctgaaagggcttgatgcggtacgc
aaacgcccgggcatgtacatcggcgataccgatgacggaaccggtctgcatcacatggta
ttcgaggtcgtggataacgcaatcgacgaagcgctcgccggtcactgtaaagatattgtc
gtgacaatccatgccgataattcggtttccgttcaggatgacggacgcggaattcctacc
ggtatccacgaagaagaaggtgtgtcggcggctgaagttatcatgaccgtgctgcacgct
ggcggtaagtttgacgacaactcctataaagtgtctggcggcctgcacggcgtaggtgtt
tccgttgtgaacgccctgtcccagaaactggaactgaccattcgtcgtgaaggcaaagtg
caccagcagatttatctgcatggcgtacctgaagcgccgctggcggttacgggagatacc
gatgcaaccggtacccgcattcgtttctggccaagccatgacaccttcaccaacgttacc
gatttcgaatacgacattctggccaaacgcctgcgcgaactgtccttcctgaactctggc
gtatcgattcgtctggaagacaagcgtgatgcaagaaacgaccactttcactacgaaggt
ggtatccgcgcctttgttgagtacctgaataaaaacaaaacgcctattcacccaaccgta
ttctatttctcaaccgagaaagacggcattggcgtggaagtcgcactgcagtggaatgac
ggcttccaggagaacatctactgcttcacgaacaatattccacagcgcgacggcggtaca
caccttgcgggtttccgcgccgcgatgacgcgtacgctgaatgcctacatggataaagaa
ggctacagcaaaaaagccaaagtcagcgcgaccggtgacgatgcccgtgaaggtctgatt
gcggtcgtgtcggtcaaagtgccggacccgaaattctcttcacagaccaaagacaaactg
gtttcttcagaagtgaaatcggccgttgagcagcaaatgaatgaactgctggctgaatat
ctgctggaaaatccgggcgatgcaaaaatcgttgtgggcaaaattattgacgccgcacgc
gctcgtgaagccgcacgccgtgcccgtgagatgacccgccgtaaaggcgcgctggatctt
gctggcctgccaggcaaactggcggactgccaggaacgcgacccggcgctgtcagaaatt
tacctggtggagggtgactctgcgggcggttctgccaagcaaggccggaaccgtaagaat
caggccattctgccgctgaaaggtaagatcctgaacgttgagaaggcgcgtttcgataag
atgctggcttctcaggaagtcgccacgttgattaccgcgctgggctgtggcatcggccgc
gatgaatacaatccggataaactgcgttaccacagcatcatcatcatgaccgatgcggac
gtcgacggctcccacattcgtacactgctgttgaccttcttctatcgtcagatgccagag
attatcgagcgtggtcacgtgtatatcgcgcagccgccgctgtataaggtgaaaaaaggt
aagcaggagcaatacatcaaggatgacgaggccatgctgcagtaccagattgctatcgcc
cttgacggtacctcgctgcataccaccgccagcgcacccgcgctaggcggcgaaccgctg
gaaacactggtcgctgaattcaacagcactcagaagatgatcaaacgcatggagcgtcgt
tatccgatggccatgctgcgtgcgctgatttatcacgacacactgagcgatatcagcaac
gaagcgcaggtgaccagttggatcaacggtctggttagctacctgacagcacgcgaggcg
cacggcagtacctatctggcccaggtgcgtgagaaccgtgagcagaatgtctttgagccg
gttttacgcgttcgtacacatggagtggacacggattatcctctggatgccgagttcctg
cagggtggcgaataccgcaagatctgtgcactgggcggcaagcttcgcggtctgcttgaa
gaagatgcctatatcgaacgtggcgaacgtcgtcagcctgtcagcagttttgaacaggcg
attgactggctggagaaagagtcgcgtcgcggtctgtcagtgcagcgatataaaggtctg
ggcgaaatgaacccagagcagctgtgggaaaccaccatggatccggacagccgccgtatg
ttacgcgtgaccatcaaagatgcgattgccgccgatcagctgttcaccacgttgatgggt
gacgcggttgaaccgcgccgcgcgttcattgaagagaatgcgctgaaagccgcaaatatt
gatatctaa
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