Pantoea ananatis PA13: PAGR_g0233
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Entry
PAGR_g0233 CDS
T01970
Name
(GenBank) GntR family transcriptional regulator YjjM
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paq03000
]
PAGR_g0233
Transcription factors [BR:
paq03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PAGR_g0233
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
HTH_Crp_2
HTH_11
HTH_DeoR
HVO_A0261_N
HTH_24
HTH_IclR
DnaD_N
Rrf2
Phage_rep_O
HTH_36
MarR_2
TrmB
HTH_23
MarR
HTH_5
EAP30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AER30773
LinkDB
All DBs
Position
complement(265487..266389)
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AA seq
300 aa
AA seq
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MSRSQNLRHNVINHMLESIAQGHIQSPLPPQAALAEMFNISRTTVRHALRYLHQRGVLEK
VKESWVIVREPEEQDSLSAVTPAIELQASQVEKRFFDMINQRLLQPGDTFSELQLAKQAN
VSPVAVREFLLHFMRYNLLEPVKRGHWQMKKFSQEYAEKLFELREMLETHALTRFLNLPR
EDERWIQARDLLDRHRSMRETIASNYRHFAALDKELHWLILSAANNPFFNQSLEIISVIF
HSHYQWDESDLKQRNIVALEEHMAILSALIGRRDVDALCALHNHLATAKRSMVRSINQYN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtagtcagaatttacgtcataacgtgatcaaccatatgctggaaagcattgcc
cagggtcatattcagtcgcccctgccgccacaggccgccctggctgaaatgtttaatatc
agccgcactacggtgcggcatgctctgcgctatctgcaccaacgcggcgtgctggagaaa
gtaaaagagagctgggtcatcgtgcgcgagcctgaagagcaagacagcctcagcgccgtc
acgccagccattgagctgcaggccagccaggtggaaaaacgcttttttgatatgattaat
cagcgactgctgcagcccggtgacacgttcagcgaactgcaactggcaaaacaggccaac
gtcagcccggtagcggtacgggaattcctgctgcattttatgcgttataacctgctggaa
ccggttaaacgcggccactggcagatgaaaaagttttcacaggagtacgccgaaaagtta
tttgagctgcgcgagatgctggaaactcatgcgcttacccgctttctaaatttgcccaga
gaggatgaacgctggatccaggccagagatctactggatcgccaccgatcgatgcgcgaa
acgatcgccagcaactatcgccattttgctgccctcgataaagagctgcactggctgatc
ctgtctgccgccaacaaccccttttttaatcagtcgctggagattatttcagtgattttt
cattcgcattatcagtgggatgaaagcgatcttaagcagcgcaatatcgtcgcgctggaa
gagcatatggcgattctgtccgccctgattggccgccgggatgtggatgcgctgtgcgca
ttgcataaccacctggctaccgccaagcgctctatggtacggagcattaatcagtacaat
taa
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