Pantoea ananatis PA13: PAGR_g0436
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Entry
PAGR_g0436 CDS
T01970
Name
(GenBank) DNA-directed RNA polymerase subunit alpha RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paq
Pantoea ananatis PA13
Pathway
paq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAGR_g0436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paq03021
]
PAGR_g0436
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g0436
Enzymes [BR:
paq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAGR_g0436
Transcription machinery [BR:
paq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAGR_g0436
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAGR_g0436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AER30975
LinkDB
All DBs
Position
467347..468336
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggt
aacgcgctgcgccgtattctgctttcatcaatgccgggttgcgcggtgaccgaggttgaa
attgatggtgtactgcatgagtacagcaccaaagagggtgtacaggaagatatcctggaa
atcctgctcaaccttaaaggtttggcggtaagagttcagggcaaagatgaagttattctt
accttgaataaatctggcattggccctgtgactgcagccgacattacccatgatggtgat
gtcgaaatcgtcaagccgcagcatgtgatctgccatctgaccgatgaaaatgcatctatt
agcatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgttagttgacgcttgctacagccctgta
gaccgtatcgcctacaatgttgaagcagcgcgtgtagagcagcgcaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccatcctggcagaacaactggaagctttcgtcgacttacgtgatgtacgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtactgaggttgagctgcttaaaacgcctaaccttggtaaaaaatctctt
accgagattaaagatgtgctggcctcacgtggtctgtctctgggcatgcgcctggaaaac
tggccaccggcaagcattgctgatgaataa
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