Pantoea ananatis PA13: PAGR_g0906
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Entry
PAGR_g0906 CDS
T01970
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paq
Pantoea ananatis PA13
Pathway
paq03410
Base excision repair
paq03430
Mismatch repair
paq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAGR_g0906
03430 Mismatch repair
PAGR_g0906
03440 Homologous recombination
PAGR_g0906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g0906
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PAGR_g0906
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PAGR_g0906
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PAGR_g0906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AER31437
LinkDB
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Position
953247..954986
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AA seq
579 aa
AA seq
DB search
MVKHEVELRRREAVADLPGLPADLPPLLRRLYLQRGVTNAAELERGAKNLLPFSALSGID
KAVNLLHQALLDGRCIMVVGDFDADGATSTALTVLALRSMGCSNVQYLVPNRFEDGYGLS
PEVVEQARARGAEMILTVDNGISSHAGVALAHQHGIAVLVTDHHLPGETLPDADAIVNPN
LPDCHFPSRSLAGVGVAFYLMMALRAHLRTQGWFGVTRSEPNLADLLDLVALGTVADVVP
LDANNRILVWQGLSRIRAGKCRPGIKALLEIANRDARQLAASDLGFALGPRLNAAGRLDD
MSVGVALLLTDDLSQSRMLASELDALNQMRKEIEQGMQSEALALCQKLENEQTDLPLGLA
FYHPEWHQGVVGILASRLKERFHRPVIAFAPAGDGMLKGSGRSIAGLHLRDALERLDTLH
PGLMQKFGGHAMAAGLSLEEARYDEFRQRFADLVGEWLAGEALQGVIWSDGALQPAEFSL
QTAEVLRDAGPWGQSFPEPAFDGRFRLLQQRLVGERHLKVMVEPLEGGPLIDGIAFNVDT
TLWPDSSVRQVELAYRLDINEYRGNRSVQLIIEHLWPLS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaagcacgaagttgagttacgtcgccgtgaagcggtagccgatttgccggggcta
ccggcagatttaccgccgctcctgcgtcggctttatctgcaacgtggcgtcaccaacgcc
gccgagctcgaaaggggcgcgaaaaacctgctccctttcagtgcactgagcggcatagac
aaggccgttaacctgcttcatcaggcgctgctggatggccgctgcattatggtcgtcggg
gatttcgacgctgacggtgccaccagtaccgccctgacggtgctggcgctgcgcagcatg
ggatgcagcaacgtgcagtacctggtgcccaatcgtttcgaagatggctacggcctgagt
ccggaagtggttgagcaggcccgcgcgcgcggtgcagagatgattctgaccgtcgataac
ggcatttcgtcccatgcgggtgtggcgcttgcgcatcagcacggcattgcggtgttggtg
accgaccaccacttaccgggcgaaacgctgcctgacgccgatgctatcgttaatcccaac
ctgcctgactgtcatttcccctctcgttcgctggcgggcgtgggcgtcgctttctatctg
atgatggccctgcgcgcccacttgcgcactcagggctggtttggcgtcacgcggtcggaa
cccaatctggccgacctgctcgatctggtggcgttgggcacggtggcagatgtggtgccg
ctggatgccaacaaccgcattttagtgtggcagggcctgagtcgtattcgggccggaaag
tgccgtccgggcatcaaggccctgctggaaatcgccaaccgcgatgcccgacagctggcc
gccagcgacctgggttttgccctggggccccggcttaacgctgccggtcggctggacgat
atgtctgtcggggtggcgctgttactgaccgacgatctcagccagtcgcgcatgttagcc
agtgaactggatgcgctgaaccagatgcgcaaagagattgagcaggggatgcagagcgag
gcactggcgttatgccaaaagctggagaacgagcaaaccgatttgccgctggggctggcc
ttttatcatcctgagtggcatcagggcgtggtcgggattctggcttcccgcctgaaagag
cgttttcatcgcccggttattgccttcgcaccggccggtgatggcatgctgaagggatcg
ggacgatcgattgccggtctgcatctgcgcgatgcgctggagcgtcttgatacgttgcat
cctggcctgatgcagaagtttggtggtcacgcgatggccgccggactgtcgctggaagag
gcccgctacgacgagtttcgtcagcgttttgcggacctggtgggcgaatggctggccggc
gaagcgttgcagggcgtcatctggtcggacggtgccctgcagcccgctgaattttctctt
cagacggcggaagtgctgcgtgatgccggcccatggggccagtctttccctgagcccgct
ttcgacggccggttcaggctactgcagcagcgcctcgttggtgaacgtcacctgaaggtc
atggttgaacctctggaaggcggaccgctgatcgacggtatcgcgttcaacgtggatacc
acgttgtggcctgacagcagcgtgcgccaggtcgaactggcctatcggcttgatatcaat
gagtatcgcggcaatcgctccgtccaactgatcattgaacatctctggccgctcagttag
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