Pantoea ananatis PA13: PAGR_g0989
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Entry
PAGR_g0989 CDS
T01970
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paq03016
]
PAGR_g0989
Enzymes [BR:
paq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PAGR_g0989
Transfer RNA biogenesis [BR:
paq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAGR_g0989
Prokaryotic type
PAGR_g0989
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AER31520
LinkDB
All DBs
Position
1047945..1048985
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AA seq
346 aa
AA seq
DB search
MTLHYLQGTPKATGVIKATPEDFVVVEDLGYQPDGEGEHVLVRIRKSGANTRFVAEALAK
FMKVSVRDLSYAGMKDRHAVTEQTLCFRVPGNSMPVLAGFALDGVDILEVVRHKRKLRIG
ALAGNAFRLVIRQVSHREETEARLVSIRDNGVPNYFGEQRFGRNGNNLVTAAKLARNEIQ
IRDRSKRGLMLSAARSALFNQVTSMRLAQQGGLTQVMNGDALQLTGRGSWFVAQPEELAE
LQTRVNQHALRITAPLPGQGEPGPQADALAFEQQCLADAGELRGLLERERVDAGRRAMLV
VPRDLRWRWQDEATLEMQFWLPAGSFATSVVRELLNSTELLDMPDE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcactacctgcagggtacgccaaaggcgacaggcgtgattaaagcgacaccg
gaagatttcgtggtcgtggaagatttgggttatcagccggatggcgagggtgagcacgtg
ctggtgcgcattcgcaaaagcggcgccaatacccgttttgttgccgaagcactggcgaag
tttatgaaggtcagcgtacgcgacctgagctatgcgggcatgaaagatcgccacgcggtc
actgaacagacgctttgctttcgcgtccccggcaattccatgcccgttctggcggggttt
gcgctggacggcgttgacatacttgaggtggtgcgccataagcgcaagctgcgcatcggt
gccctggcgggaaatgcattccggctggtgatccggcaggtcagccatcgtgaggaaaca
gaggcgcggctggttagcatccgtgataacggcgtgcccaactattttggcgaacaacgc
tttggccgcaacggcaataacctggtgacggcagcaaagttagcgcggaacgagattcag
atacgcgatcgcagcaagcgcggactgatgctctcggcggcgcgcagtgcgctgtttaat
caggtgaccagcatgcgtttagcgcagcagggcggattaacccaggttatgaacggggat
gcactgcagcttaccggtcgcggcagctggttcgttgcccagccggaagagctggccgag
ctgcagacgcgtgttaatcagcatgcgcttcgcattacggcaccgttaccggggcagggc
gagcccggccctcaggcggatgcgctggcttttgaacagcagtgcctggccgatgccggt
gagctgcgcggtctgcttgagcgtgagcgcgtggatgccgggcgccgggcgatgctggtg
gttccgcgcgacctgcgctggcgctggcaggatgaggccacgctggagatgcaattctgg
ctgcccgcaggcagctttgccaccagcgttgtccgggagttgctcaacagcaccgagtta
cttgatatgcctgacgaataa
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