Pantoea ananatis PA13: PAGR_g0993
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Entry
PAGR_g0993 CDS
T01970
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paq03021
]
PAGR_g0993
Transcription machinery [BR:
paq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PAGR_g0993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AER31524
LinkDB
All DBs
Position
1051982..1052974
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AA seq
330 aa
AA seq
DB search
MSQNTLKVNELHENAEFEENGAEIFDEKALVENESGDNDVAEEELLAQGATQRVLDATQL
YLGEIGYSPLLTAEEEVLFARRALRGDIPSRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQGQGLSIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaatacgctgaaagtaaacgagttacatgagaacgcggaattcgaagagaat
ggagcagagatttttgatgagaaggcactcgttgaaaatgaatctggcgacaatgatgta
gcagaagaggagttgctggcgcagggtgcgacgcaacgtgtacttgatgctactcaactc
tatcttggggagattggctattctccattgctgacggcagaggaagaagttctctttgct
cgccgcgcattacgaggtgatattccttctcgtcgccgcatgatcgaaagtaacttacgc
ctggtggttaagattgcccgacgttacagcaatcgcggtctggctctgctggacctgatt
gaagaaggtaacctcggcctgatccgcgccgttgaaaagtttgatccagaacgtggattc
cgcttctcaacgtatgccacctggtggattcgtcagaccattgaacgggcaatcatgaac
cagacccgtacaattcgtttgccaatccatattgttaaagaactgaacgtttatctgcgt
actgcgcgtgaactttctcacaagcttgaccatgagccgagtgcggaagaaattgcagaa
caactggataaaccggttgatgacgttagtcgtatgttgcgtctcaacgaacgcattacc
tcagttgatactccactgggaggggattctgagaaagcgctgctggatattctggccgat
gaaaaagacaacggcccagaagacactacgcaagatgacgatatgaaacaaagtatcgtt
aaatggttgttcgaactgaacgctaagcagcgcgaagtgttggctcgtcgtttcggcctg
ttgggctatgaagcggcaacgctcgaagatgttggccgtgaaatcggtttaacccgcgag
cgtgtgcgccagattcaggttgaaggtttgcgccgtctgcgtgaaatcctgcaggggcag
ggcctcagcattgaagcactgttccgcgaataa
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