Pantoea ananatis PA13: PAGR_g1023
Help
Entry
PAGR_g1023 CDS
T01970
Name
(GenBank) ribosomal large subunit pseudouridine synthase D RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paq03009
]
PAGR_g1023
Enzymes [BR:
paq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PAGR_g1023
Ribosome biogenesis [BR:
paq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PAGR_g1023
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
AER31554
LinkDB
All DBs
Position
1083366..1084346
Genome browser
AA seq
326 aa
AA seq
DB search
MAQQVQLTATVSESQLGQRLDQTLAELFPDYSRSRIKEWILNQRVSVNGTVTDKPKEKVL
GGERVTIDAEIEEEQRWEPQNIPLDIVYEDEDIIVINKPRDFVVHPGAGNPDGTVLNALL
HHYPAIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTHLVDALQRREITREYEAVAIGTMT
AGGTVDEPISRHSTKRTHMSVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
SHINHPLVGDPLYGGRPRPPKGASEDFITTLRGFDRQALHATMLRLYHPISGIEMEFHAA
IPQDMIDLIDALKADTEMFKDQLDWL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaagttcaactcaccgcaacggtatccgagtcacaactcggacaacgttta
gatcaaactttggcggaattgttccctgattattcacgttcccgcataaaagagtggatc
cttaaccagcgcgtcagtgtcaacggcactgtgactgataagccgaaagaaaaagtgctc
ggcggcgagcgcgtgaccatcgatgctgagatcgaagaagagcagcgctgggaaccccaa
aatatcccgctggatatcgtctacgaagatgaagatatcattgtcatcaataaaccacgt
gactttgtggtgcatccgggcgcgggcaatcctgatggcaccgtactcaatgcgctgctg
catcactatcccgccattgccgatgtgccgcgcgcgggcatcgttcatcgcctggacaaa
gatacaaccgggctgatggtcgtggcgaaaaccgtcccggcgcaaacgcaccttgtcgac
gcccttcagcgccgtgaaattacacgtgaatatgaagcggtcgccatcggtacgatgact
gctggcggcacggtcgatgaaccgattagccgtcactcaactaaacgtacgcatatgtcc
gtgcatcccatggggaaaccggctgtcactcactatcgcatcatggagcatttccgtgct
catacgcggttgcgtctgcgcctggaaaccggccgtacgcaccagatccgtgtgcatatg
tcgcacattaatcatcctctggtgggcgacccgctttacggtggccgtccgcgtccgcca
aaaggcgcatcggaagactttattaccacgctgcgcgggtttgatcgccaggcgctgcat
gcgacgatgctccggctttaccatcctatctctgggattgagatggaattccatgccgcg
atacctcaggacatgattgatctgattgatgcgctgaaagcggatacagagatgttcaag
gatcagctggactggctatga
DBGET
integrated database retrieval system
