Pantoea ananatis PA13: PAGR_g1076
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Entry
PAGR_g1076 CDS
T01970
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paq03000
]
PAGR_g1076
Transcription factors [BR:
paq03000
]
Prokaryotic type
Helix-turn-helix
Other families
PAGR_g1076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
PAS_8
Mg_chelatase
DUF87
HTH_50
AAA_3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AER31607
LinkDB
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Position
1151584..1153542
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AA seq
652 aa
AA seq
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MTPVNISFIVILILDEIASDKSEPSMKSNEIVIFSVSKTITQRILNVLIEKQLELPVYET
GYSEVLDKANEMIRSGTKIIISRGGTAALLRSNVTIPVIEIAHDFHGIYRILKQAKNKSQ
KIAAVGFPQFCNALKHYQNMTNENLKICQVYNHYDIESVVKNLAENNYKVVIGGLTVAEM
AKKYDLNVVMGDTDNNSIEQAINEAFSLLKYIHQESLKLDMSYSAMNQSREGIMCIDQMG
EVVSINNRGKTLFQCHAGDKIYRKDAFKEVYRSIIDESDVKEMIVELDGDFICTSIKHYT
KRQDGYSIVTGFIQGKSQWRNSADKKIKQQGFYTRYAFDDIIGHSASINIAIDKAKLCAR
HDAPIHILGDTGTGKELFAQSIHHHSIRKHGPFIAINCAAIPENLLESELFGYAEGAFTH
ARKGGKPGVFEMAMKGTVFIDEISEAPLNVQVKLLRVLQEKQFVRLGGEALIAADFRLIT
ASNKDLHVLVQSGVFRQDLYYRINILELRLPALAEREGDIELLARHLLHQQGKEIAFTPD
ALDVLRRHRWPGNIRELQSVIYRLAVFHDRDVVDKDELLRAVQVADDFGSASQQSLLCEP
AESETHLLKKQEKHLITRIITQTQGDKVRAAAILGISPTTLWRKLKEYDLNG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgtcaatatctcattcatcgttatccttatactcgatgaaatagcgagcgac
aaaagcgaaccttcaatgaagtctaatgaaatcgtcattttctccgtttcaaaaaccatt
acccaacgcattttaaatgttcttattgaaaagcagcttgaactgccagtgtacgaaacg
ggctattcagaagtattagataaagcgaatgaaatgattcggtctggaacgaaaatcatt
attagtcgtggcgggactgccgcgcttcttcgcagcaatgtgaccattccagtgatcgag
atagcgcatgattttcatggcatttatcgtattcttaagcaggcgaaaaataaatcgcaa
aaaattgctgcggtaggttttccccaattttgtaacgcgctcaagcattaccaaaacatg
accaatgaaaatctaaaaatctgtcaggtctataatcactatgacatcgaaagtgttgta
aaaaatcttgcagaaaataactacaaagtcgttataggcggtctgacagttgcagagatg
gcgaagaaatatgacctcaatgttgtgatgggggacacggataataattcaattgagcaa
gccatcaacgaggccttcagtttgctgaaatatatccatcaggaaagtctgaagttggat
atgagctattccgcgatgaatcagtctcgtgaaggcattatgtgcattgaccaaatgggg
gaggtggtgagcattaacaacagagggaaaaccctttttcagtgtcatgctggcgataaa
atttaccgcaaagacgctttcaaagaggtttatcgctcaattatcgatgagtcagacgta
aaggaaatgatcgtagaactcgacggtgattttatctgtacctcaataaagcattacacc
aagcgccaggatggctattccatcgttaccgggtttattcaggggaagagccagtggcga
aacagtgcagacaaaaagataaaacagcaaggcttttatactcgctacgcttttgatgac
attattggtcattcagccagcattaacatcgcgattgataaagccaagctgtgcgcgcgt
catgatgcccccattcatattttgggtgataccggcaccggcaaagaactctttgcgcag
agtattcatcatcacagcatccgaaaacatggcccctttatcgcaatcaactgtgctgcc
attcctgaaaacctcctggaaagcgagctgtttggctatgctgagggggcatttactcat
gcgcggaaaggtggcaagcccggcgtgttcgaaatggcgatgaagggaacggtttttatt
gatgagatcagcgaagcgccgctcaatgtgcaggttaaattactgcgtgtcctgcaggaa
aagcagtttgtccgtctggggggagaggcgctcattgcggcagactttcggctgattacc
gccagcaataaagatctgcatgttttggttcagtcgggcgtttttcgccaggatctttac
taccgaatcaatatcctggaactcaggctgcctgcactggctgagcgcgaaggggatatt
gaattactggcgcggcatttactgcatcagcagggaaaagagatcgcgtttactccggat
gcgctggatgtcttaaggcggcaccgctggccgggtaacatccgcgaattacagtcggtt
atctacaggctggccgtgtttcacgatcgcgatgttgtggacaaagacgaactgctcagg
gccgtgcaggttgccgatgattttggctctgccagccagcaatccctgctttgcgagcct
gcggagagcgaaacccatttgcttaaaaagcaggaaaaacacctcatcacgcgtatcatc
acccaaactcaaggggataaggtcagggcggcagccatccttggcatcagcccgaccacc
ctgtggcgtaagttgaaagagtacgatcttaacggctaa
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