Pantoea ananatis PA13: PAGR_g2052
Help
Entry
PAGR_g2052 CDS
T01970
Name
(GenBank) diguanylate cyclase/phosphodiesterase YciR
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
paq
Pantoea ananatis PA13
Pathway
paq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAGR_g2052
Enzymes [BR:
paq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PAGR_g2052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AER32567
LinkDB
All DBs
Position
complement(2224965..2226950)
Genome browser
AA seq
661 aa
AA seq
DB search
MTDEQGQSLLYTLFGTTSPHWRLTADSDALLFALDESSNTSVAVPLTPGQCSLLRAMPVI
TSSINLTLTIHGEQVAMHFVGRRINQSVWAGTASAWGDTSAVARDLTLGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLYEQDVIGRNVFQLFMTKQEAAASRRNIAGFFRDG
NSYEVERWIKTMKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVMANTD
GITGLPNRHAIHQQISHALERAEGSETGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLSKNQTLGRLGGDEFVVLAEHTSQAALEAMATRILDRLRQPFRIGLIEVYSGCSVGI
ALAPLHGEDRECLIRNADTAMYHAKENNRGSYCVFAEEMNRRVFEYLWLDTNLRKALEQD
HLLVHYQPKVDADGKVRSAEALVRWNSPERGLVSPGEFIPYAEESGLIVPLGRWVMLNVL
KQIIAWREQNIYLRVAVNVSARQLLDQTIYSDLKQALTDAGLTECPVDIELTESCLIENE
AEALKLMRKFQELGAQIHLDDFGTGYSSLSQLARVPINAIKLDQSFIRNVNKRPVSQSLV
RAIVAVAKALDLQVIAEGIETVDEEAFVLKSGVDGRQGYFYAKPMPADQFGHWLAQHPAR
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacaagggcaatcgttgttgtataccttgtttggtacaaccagccctcat
tggcgattaaccgcagacagtgatgcgctgctttttgccttagatgaatcatcgaacacc
agcgttgctgtgccactgacgcccggccagtgcagtttattgcgcgcgatgcccgttatt
acttccagtattaatctgacgttaacgattcacggcgagcaggtcgccatgcattttgtt
ggccggcggatcaaccagtccgtgtgggcgggcaccgcttcggcatggggcgatacgtcg
gcggtggcgcgcgatctgacgctgggcctgtcatttgctgaacaggtcgtgtcggaggcc
aactcggtcatcgttatccttgatcagcgcggcaacattcaacgctttaaccgcctcagc
gaagagtataccggcctgtatgaacaggatgtgatcggccgtaatgttttccagctgttt
atgaccaaacaggaagccgcggcctcacgcaggaacatcgcagggttctttcgcgatgga
aattcctacgaagtggaacgctggatcaagacgatgaaaggacagcgactgtttcttttt
cgtaataagtttgttcacagtggcagcggtaaaaatgaaattttcctcatctgttcagga
acggatattacggaagaacgccgtgcgcaggagcgcctgcgcgtgatggctaacacggat
ggcatcactggcctgcccaatcgccacgcgattcaccagcaaatcagccatgcgctggag
cgggctgagggaagtgaaaccggcgtggtctacctggatttagataatttcaaaaaagtg
aatgatgcctacggtcatatgttcggcgatcaactgttgcaggccgtttccctggcgatt
ctgagctgtctgagcaagaaccagacgcttggacggctgggcggtgacgagtttgtggtg
ctggctgagcacaccagtcaggctgcgctggaagcaatggctacgcgcattctcgatcgc
ctgcgtcagcctttccgcatcggcctcatcgaggtttacagcggctgctccgtcgggatc
gccctggccccgctacatggagaggaccgtgagtgtctgattcgtaacgctgatacggcg
atgtatcacgccaaagagaacaaccgtggcagctattgtgtttttgccgaagagatgaac
cgccgggtttttgaatatctctggctcgacaccaacctgcgtaaagcgctggagcaagac
catttattagtgcactaccagcccaaagtggatgctgacggtaaagtgcgcagtgcggaa
gcgctggttcgctggaactcacccgagcgcgggctggtttcacccggggaatttattccc
tacgcggaagaatccgggctgatcgtgccactgggtcgctgggtcatgcttaacgtgctg
aagcaaattattgcctggcgggagcagaatatttatctgcgcgtcgcggttaatgtctcg
gcgcgccagttactcgaccagacaatctacagtgacctgaaacaagccctgacggatgcc
ggtttaaccgagtgcccggtggatatcgaactgacggaaagctgcctgattgagaatgaa
gccgaagcgctcaagctgatgcgtaaatttcaggaactgggtgcccagattcaccttgat
gactttggcaccggttattcctccctttcacagctggcgcgcgttcctattaatgctatt
aaactggatcaaagctttatccgtaatgtgaataaacgtcccgtttctcagtcactcgtc
agggcgattgttgcggtagcgaaggcgcttgatttgcaggtgattgccgaaggtattgaa
accgtcgatgaagaagcctttgtgttaaaaagcggcgtcgatgggcggcaaggctatttt
tacgcaaaaccaatgcccgccgatcagtttgggcactggctggctcagcatcctgcccgc
gtgtaa
DBGET
integrated database retrieval system
