Pantoea ananatis PA13: PAGR_g3207
Help
Entry
PAGR_g3207 CDS
T01970
Name
(GenBank) DNA-binding protein HU-beta HupB
KO
K03530
DNA-binding protein HU-beta
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paq03032
]
PAGR_g3207
03036 Chromosome and associated proteins [BR:
paq03036
]
PAGR_g3207
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g3207
DNA replication proteins [BR:
paq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PAGR_g3207
Chromosome and associated proteins [BR:
paq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PAGR_g3207
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PAGR_g3207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AER33699
LinkDB
All DBs
Position
complement(3458834..3459106)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAFMGSVSDALKGGDEVALVGFGTFSVRERAARTG
RNPQTGKEITIPAGKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatcgataaaattgctgccgatgccgacatttctaaagcagca
gcaggacgtgtgttagatgcatttatgggctctgtttctgatgcgctgaaaggcggagat
gaagtggcgctggtgggattcggcactttctcagtacgtgagcgcgcagcgcgcacaggc
cgtaacccacaaaccggtaaagagatcactatcccggcaggtaaagtaccgggtttccgt
gcaggtaaagcactgaaagacgctgtcaactaa
DBGET
integrated database retrieval system
