Pantoea ananatis PA13: PAGR_g3223
Help
Entry
PAGR_g3223 CDS
T01970
Name
(GenBank) Fis family GAF modulated sigma54 specific transcriptional regulator AcoR
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paq03000
]
PAGR_g3223
Transcription factors [BR:
paq03000
]
Prokaryotic type
Helix-turn-helix
Other families
PAGR_g3223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_2
AAA_5
HTH_30
HTH_7
Mg_chelatase
HTH_23
AAA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AER33715
LinkDB
All DBs
Position
3478199..3479974
Genome browser
AA seq
591 aa
AA seq
DB search
MQHKVSDALLPAIDNNPLLSDSWLRSQLYGLDRSADDFPRVRQAELTELVASNTDLQQFA
QPIMHKLAQKVTQMQSVVILSDAAGRVLHTFGEMQAMQKAQRFALAPGNIWSECGRGTNA
IGTALAIDDGCEIEGNQHFLTRNQGLYCAAMPLQMPNGQIAGVLDVSGPAHFSHAHTFAW
VKQAARHIEYLWVKQSLHPQQWLMSLHSNAHRLDSPDELLLVFSDNVLTAANRLALRGLG
LHAEQLGVITFQQLFPHGDLRATALPTPVMIGPQPYYFRLRAPTRTRFSVAAGPARPLPF
SLQHEGDKMVRLLNAGVSLCIRGETGSGKEYVSRALHQQSRWREGKFVAINCAAIPESLI
ESELFGYQPGAFTGASKNGYIGKIREADGGVLFLDEIGDMPLALQTRLLRVLQEKEVAPL
GSSQSWPVNLAVISATHRDLAQRVSQGDFREDLLYRLQEFSFTIPPLRDWSSLPAFITQL
WDALGGGARQIGLSSEVLATLTRYSWPGNVRQLRSLMKVLLALAEDGDSVEITHLPEEYR
SGNAAASPARQQHDDRLIKATLQQFNGNISKTAQALGVARSTLYRRAAREK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacaaggtttccgatgctctattgcccgctatcgataacaaccccctgctgagt
gattcctggctacgcagccagctctacggactggatcgttcggccgatgattttcctcgc
gtacgtcaggccgagctgacagagctggtggccagtaatactgacctccagcagtttgct
cagcccatcatgcacaagctggcccagaaggtgacgcagatgcagtcggtggtcattctg
tctgacgcggcaggccgggtgctgcacacctttggcgagatgcaggcgatgcaaaaagca
cagcgtttcgcccttgcccccggcaacatctggagcgaatgtggccgtggcaccaacgcc
attggtacggcgctggcgatagacgacggttgtgaaatcgagggtaatcaacacttcctg
acccgcaaccaggggctttactgtgccgccatgccgctgcaaatgcctaacgggcagatt
gcgggggtactggatgtctccggccctgcgcatttttcccatgcccatacgtttgcctgg
gtcaaacaggcggcacggcacattgagtatctgtgggttaagcagagcctgcatccccaa
caatggctgatgagcctgcacagcaacgcacaccggctagacagcccggatgagctgctg
ctggtgttttcagacaacgtgctgactgccgcaaatcggctggccctgcgtgggcttggc
ctgcacgccgaacagcttggcgtcatcacatttcagcagctgtttcctcacggcgatctg
cgggccaccgcactgccaacgccggtgatgatcggaccccagccttattattttcgtctg
cgtgcgcccacccgaacccgcttcagcgtagcagcaggccctgcgcgtccgctgcctttc
tcactgcaacatgagggagataaaatggtgcggctgctgaatgccggcgtttcattgtgc
attcgcggggaaaccggcagcggaaaagagtacgtcagccgcgcgttacatcagcaaagc
cgctggcgggaaggaaagtttgtggcgattaactgcgccgcgattccggaatccttgatc
gaatctgaactctttggctaccagccgggggcatttaccggtgccagcaaaaatggctac
atcggtaaaatccgtgaggccgatggcggcgtcctgtttctggatgagatcggcgatatg
ccactggcgctgcaaacccggctcttacgcgtgctacaggaaaaagaggtcgcgccgctg
ggatccagtcagagctggccggttaacctggccgtgatcagcgcgacacatcgggatctg
gcgcaacgcgtctcacagggcgacttccgcgaggatctcctgtaccggctgcaggaattt
tcattcacgatcccgccgctgcgtgactggtcttctcttccggcgtttatcacgcaactc
tgggacgcgctgggcggcggcgcgcgtcagatcggcttgtcttccgaagtgctggcgaca
ttaacgcgctattcctggccgggcaacgtgcgccagctacgcagcctgatgaaagtcttg
ctggcgctggcggaagatggcgatagcgtggagatcacgcatttacctgaggagtaccgc
agcggcaacgccgcggcatcacccgcgcgccagcagcatgacgatcgtctgataaaagcg
acgttgcagcagtttaacggcaacatcagcaaaacggcgcaggcgctcggcgttgcgcgc
agcacgctgtatcgccgcgctgcacgcgagaagtga
DBGET
integrated database retrieval system
