Pantoea ananatis PA13: PAGR_g3253
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Entry
PAGR_g3253 CDS
T01970
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g3253
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAGR_g3253
Archaeal homologous recombinant proteins
PAGR_g3253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AER33745
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Position
3509652..3510848
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AA seq
398 aa
AA seq
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MRIIHTADWHLGQFFYNKSRAAEHQAFLDWLLIQIEQHQVDALIVAGDLFDTGTPPSYAR
EMFNRFVVALQPSGCQLVVLAGNHDSVATLNESRELLACLNTRVVATPQESDDVMILTTR
QGEPGALLCAIPYLRPRDIMRSQAGQSGRDKQLSLLEAISAHYQRSFAAAQALNMSLPIV
ATGHLTALGVSKSDSVRDIYIGTLDAFSASAFPPADYIALGHIHRAQRVANSDHIRYSGS
PIPLSFDELGSEKSVCLLTFSPRGLETLTLPVPTFQPMQMLKGSLAQISEQLAHLSPPSG
EKPVWLDIEVTTQEYLSDLQRQVEALTADLPVEVLLLRRSREQRQHSLAQTDNETLSELK
VEEVFARRLALNEELDDKQIAQVTTLFKQTLADLEANP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacaccgcggactggcacctggggcagttcttctataacaagagccgc
gccgccgagcaccaggcctttcttgactggctgttaatacagatcgaacagcatcaggtc
gatgcgctgattgtggcgggtgacctgtttgataccggtacgccgcccagctatgcgcgt
gaaatgtttaaccgcttcgtggtggcgttacagcccagcggctgtcaactggtggtgctg
gcgggcaatcatgactcggtggcaacgctgaatgaatcgcgcgaactgctggcctgtctg
aacacccgggtcgttgccacgccgcaggagagtgacgacgtcatgatcctgacaacccgt
cagggtgaacccggcgcgctgctgtgcgcgattccctatctgcgcccgcgcgacattatg
cgcagccaggccggtcagtctggacgggataaacagctcagcctgctggaggccatcagc
gcccattatcagcgcagctttgcggcggcacaggcgctgaacatgtccctgccgatcgtg
gcgaccggccaccttaccgcccttggcgtcagcaaaagtgactccgtgcgcgatatctac
atcggcacgctggatgcgttttctgcctcggcgtttccgccggccgattacatcgccctt
ggacatattcatcgcgctcagcgcgtcgcgaacagcgaccatattcgctacagcggctcc
cctattccgctgagctttgacgagctgggcagcgaaaaaagtgtctgtctgctgactttc
agcccgcgcggcctggaaaccctgaccctgccggttcccaccttccagccgatgcagatg
cttaaaggctccctggcgcaaatcagtgagcagctcgcccacctttcccctcccagcgga
gagaagccggtctggctcgatatagaagtcaccacccaggagtacttaagcgatctgcag
cgccaggttgaagcgctgacggcagatttaccggtggaagtactgctgttacgccgcagt
cgtgaacagcgccagcacagcctggcgcaaacggataacgaaaccctgagcgaacttaag
gtcgaagaggtttttgcccgacgcctggcgcttaatgaggagcttgatgacaagcagatc
gcccaggtcacgaccctgtttaagcagacgctggccgacctggaggcgaacccatga
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