Pantoea ananatis PA13: PAGR_g3391
Help
Entry
PAGR_g3391 CDS
T01970
Name
(GenBank) DNA polymerase III alpha subunit DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paq
Pantoea ananatis PA13
Pathway
paq03030
DNA replication
paq03430
Mismatch repair
paq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAGR_g3391
03430 Mismatch repair
PAGR_g3391
03440 Homologous recombination
PAGR_g3391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paq03032
]
PAGR_g3391
03400 DNA repair and recombination proteins [BR:
paq03400
]
PAGR_g3391
Enzymes [BR:
paq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAGR_g3391
DNA replication proteins [BR:
paq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAGR_g3391
DNA repair and recombination proteins [BR:
paq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAGR_g3391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AER33883
LinkDB
All DBs
Position
complement(3651493..3654975)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLIKKAAALGMPAIAITDFTNLCGLVKFYGSAHGA
GVKPIIGADFNVASELMGDELTQITVLAANNTGYQNLTLLISRAYQRGYGIAGPIIDRDW
LAELQEGLILLSGGRRGDVGRSLLRGNSALVSDCLAFYQQHFADRYFLELVRTGRPDEES
YLHAAVELAIAEGIPVVATNEVCFINEEDFDAHEIRVAIHDGYTLDDPKRPRHYSPQQYM
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSREGL
EERLAMLFPDEAVRAEKRPEYDERLEVELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGQYPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLPPIDIATIPLEDKKSFDML
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKDGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYQFHVNDEGEIVYGIGAIKG
VGEGPIEAIIDARNEGGYFRELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALNDALKAADQHAKAEAIGQADMFGVLADEPEQVEQSYASVTPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTDRGKITVAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccccgttttatacatctgcgcgtacacagcgactattccatggtcgacggc
ctggcgaaaaccggcccgttgatcaagaaagcggctgcgctgggtatgccagccatcgcg
attaccgacttcaccaacctttgcgggctggtgaaattttacggtagtgcgcacggggca
ggggttaaaccgattatcggggcagattttaacgttgccagcgagttgatgggcgatgaa
ctgacccagattaccgtgctggcggcaaataataccggctatcagaatctgacactgctg
atttcccgtgcttaccaacggggttacggtattgctggcccgattatcgatcgcgactgg
ctggccgaactgcaggaagggctgattctgctgtccgggggccgtcgaggggatgttggc
cgcagcctgctacgaggtaacagcgcgctggtgtctgactgcctggctttctatcaacag
catttcgccgatcgctacttcctggagctggtccgtaccggtcgtcctgatgaggagagc
tatctgcatgcggcggttgagctggcgattgcagaagggatccccgttgttgccacgaat
gaagtctgcttcatcaatgaagaagatttcgacgcccacgaaatccgcgttgccattcat
gatggttacacgctcgacgatccgaaacgtccccgtcattacagtcctcagcaatacatg
cgcagcgaagaggagatgtgcgagctgttcgcggacatcccggaagcgctggaaaacagc
gtagagattgctaagcgctgtaacgtcacggtccggctgggtgagtactttctgccccag
ttcccgacaggggatatgaccacagaagactttttggtgatgaaatcccgcgaggggctg
gaagagcgcctcgcgatgctgtttccggacgaagccgtacgggccgaaaagcggccggaa
tacgatgaacgtctggaagtggaactcaacgttattaaccagatggggttccctggctac
ttcctgatcgtgatggagtttatccagtggtcgaaagataacggcgtgccggttgggccg
ggccgtggttctggtgcgggatccttagtcgcctatgcgctcaagatcactgaccttgat
ccgctcgagttcgacctgctgttcgaacgtttcctgaacccagaacgtgtttccatgccc
gacttcgacgtcgatttctgcatggagaaacgtgaccaggtgattgaacacgtggccgac
atgtacggccgcgaagcggtgtctcagattattactttcggtacgatggcggctaaggcg
gtcattcgtgacgtgggacgcgttctgggccatccctatggttttgtcgatcgtatttca
aagctggtgccgcccgatccgggcatgacgctggaaaaagcctttgctgcagaaccgcaa
ctgccggaaatttatgaggccgatgaggaagtcaaagcgctaattgatatggcgcgcaag
ctggaaggtgttacgcgaaacgccggtaagcacgcgggtggggtagtgatcgcgcccacc
aaaattaccgattttgcgccactgtactgtgacgaaaacggccagtatccggtgacgcag
tttgataaaaatgatgtggaatatgccggcctggtgaagtttgacttcctggggctgcgt
acgctgaccattatcgactgggcactgaagatgattaacccgcgccgtgaaaagcagggg
ttgccgccgatcgatatcgccaccattccgcttgaagacaagaaaagctttgatatgctg
cagcgcgcggaaaccacggcggttttccagcttgaatcgcgcggcatgaaagatctgatc
aagcgtctgaaacctgactgctttgaagacatgatcgccctcgtggcgctgttccgccct
ggcccgttgcagtcgggcatggtggataactttatcgaccgtaagcacggtcgggaagcc
atctcctatcctgatatccagtggcagcatgaaagcctgaagcctgttctcgagccgacc
tacggcattatcctgtatcaggaacaggtgatgcagatcgcccaggtcctgtctggctat
acgctcggcggggcggatatgctgcgtcgcgccatgggtaaaaagaaacccgaagagatg
gccaagcagcgctccgtttttaaagacggcgctgaaagcatgggcatcgacggcgaactg
tcgatgaaaatcttcgatctggtagagaaatttgccggatacggttttaacaaatcgcac
tctgcggcttatgcgctggtgtcctatcaaacgctgtggctgaaagcgcattatccggcc
gaatttatggctgcggtcatgacggcggatatggataacacggaaaaagtggttggcctg
gtggatgagtgctggcgcatggggctaaaggtcctgccgccggatattaactcgggcctg
tatcagttccacgtcaatgatgagggcgagatcgtttacggcatcggcgccattaaaggc
gtcggtgaagggccgatcgaagcgatcatcgatgcgcgtaacgagggcggttatttccgg
gagctgttcgatctctgtgcgcgcaccgataccaaaaagatcaaccgtcgggtcatggaa
aaactgatcatgtcaggtgcctttgatcgtctcggcccgcatcgcgctgccttaatgagt
gcccttaacgatgcgctgaaggcggcggatcagcatgcgaaagccgaagcgatcggccag
gcggacatgtttggcgtactggccgacgagcctgaacaggtagaacagtcctatgccagc
gtgacgccctggccggaacaggtgcagttggatggtgaacgcgaaacccttgggttgtat
cttaccggccatcctattaatcagtatttaaaagaaattgagcgttacgttggcgggatg
cgtttgaaagatatgcatcctaccgatcgtggtaagattaccgttgcggcaggtctggtg
attgctgcgcgtgtaatggtgaccaaacgcggcaaccgaattggtatttgtacacttgac
gatcgttccggccgtctcgaagtcatgttatttaccgatgcgttagataaataccagcaa
ctgctggagaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagt
ggtgggcttaaaatgaccgcccgggaagtcatggacatcgacgaagcgcgcgaaaaatac
gcccgtggacttgctatctcgctgacggacaggcaaattgatgaccagctattaaaccga
ctccgtcagtccctggaacctcatcgttcagggacaattccggtgcatctctactatcag
agagccgacgcgcgagcgaagctacgctttggtgcagcgtggcgaatttcgcccagcgat
cgtttactcaacgatttgcggtcgttaattggatcggagcaggtggaactggagtttgac
taa
DBGET
integrated database retrieval system
