Pantoea ananatis PA13: PAGR_g3717
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Entry
PAGR_g3717 CDS
T01970
Name
(GenBank) polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paq
Pantoea ananatis PA13
Pathway
paq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAGR_g3717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paq03019
]
PAGR_g3717
03016 Transfer RNA biogenesis [BR:
paq03016
]
PAGR_g3717
Enzymes [BR:
paq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PAGR_g3717
Messenger RNA biogenesis [BR:
paq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PAGR_g3717
Transfer RNA biogenesis [BR:
paq03016
]
Prokaryotic type
tRNA degradation factors
PAGR_g3717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AER34206
LinkDB
All DBs
Position
complement(4046987..4049116)
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AA seq
709 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKTKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMIGASAALALSGLPFNGPIGAARVGYINDQYVLNPTADELKTSRLDLVVA
GTQNAVLMVESEAEILSEEQMLGAVVFGHDQQQIVIENINSLVAEAGKPRWDWQPEQANT
ALISRVAALAETRISDAYRITDKQERYTQVGVIKDETIAALLAEDESLDAAEIGDIVHSL
EKNVVRTRILNGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQNLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKAED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKASVAGIAMGLVKEDDKFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRQEISEFAPRIYTIKINSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATETKPEAVAAESAPDAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgtacgcaaattccaatatggtcaacataccgtcacgctggaaacc
ggcatgatggctcgccaggcgaccgccgccgtgatggtgagcatggacgataccgcagta
tttgtcaccgttgttggtcagaaaaaaaccaagccaggtcaggactttttcccactgacc
gttaactatcaggagcgtacttacgctgctggtcgtatcccaggtagcttcttccgtcgt
gaaggtcgcccaagcgaaggcgaaaccctgatttcacgtctgattgaccgtccggtgcgt
ccgctgttcccggaaggtttcgtcaacgaagtgcaggttattgcgaccgttgtttcagtt
aacccacaggttcacccggacatcgttgccatgatcggtgcttctgcagccctggcgctg
tcaggtctgcctttcaacggccctatcggtgcggcacgcgtaggttatatcaatgaccag
tacgtactgaacccaacggctgatgagctgaaaacatcccgtctggacctggtggttgcc
ggtacacagaacgccgttctgatggtggaatctgaagcggaaatcctgtctgaagagcag
atgctgggtgcggtggtgtttggccacgatcagcagcagatcgtgattgaaaacatcaac
tcactggttgccgaagcgggcaaaccgcgttgggactggcagccagagcaggcaaatact
gcactgatttcacgcgttgcggcgctggccgaaacccgtatcagcgatgcataccgcatt
accgataagcaagagcgttacacccaggttggcgtcattaaagacgaaaccattgctgcg
ctactggcagaagatgaatcactcgatgcggccgaaatcggcgatatcgttcacagcctg
gaaaagaatgtggttcgtacccgcatcctgaacggcgagccacgtattgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgcacgggcgttctgccacgtacacacggttcc
gcactgttcacccgtggtgaaacacaggcgctggtgaccgcgacgctgggcaccacccgc
gatgcgcagaacctggatgaactgatgggcgaacgcactgacagcttcctgttccactat
aacttccctccgtactccgttggtgagaccggtatggtgggctcgcctaagcgtcgtgaa
atcggtcacggtcgtctggcgaagcgcggcgtgctggccgtgatgcctaaagctgaagat
ttcccgtataccgtgcgtgtggtttctgaaatcaccgaatctaacggttcctcttctatg
gcctcggtctgtggtgcctctctggcactgatggatgccggtgtgccaatcaaggcctct
gttgcgggtatcgcaatgggcctggtgaaagaagacgacaagtttgttgtcctgtccgac
atcctgggtgatgaagatcatctgggcgatatggactttaaagtcgccggtagccgtgaa
ggtatcactgcgctgcagatggacattaaaatcgaaggcatcacccgcgagatcatgcag
gttgcgctgaaccaggccaaaggtgcgcgtctgcacattctgggcgtaatggaacaggct
atcagcacgccgcgtcaggaaatctctgagttcgcaccgcgcatttacaccatcaagatc
aattcagacaagatcaaagatgtgattggtaaaggcggttctgtgatccgtgcgctgacc
gaagaaaccggtacaaccatcgaaatcgaagatgacggtaccgtgaaaatcgcagcaacc
gatggtctgaaagcgaaagaagcgattcgtcgtatcgaagagatcaccgcagaaatcgaa
gtgggccgtatctacagcggtaaagtcacacgtatcgtagactttggtgccttcgtcgct
atcggcggtggtaaagaaggtctggtgcatatttctcaaatcgccgataagcgcgttgag
aaagtgactgactatctgcagatgggtcaggaagtcccggtgaaggtgatggaagtcgat
cgccagggccgcgtacgtctgagcatcaaagaagcgacagaaaccaagcctgaagctgtt
gcagctgagagcgcacctgacgctgaataa
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