Pantoea ananatis PA13: PAGR_g3719
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Entry
PAGR_g3719 CDS
T01970
Name
(GenBank) tRNA pseudouridine synthase B TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paq03016
]
PAGR_g3719
Enzymes [BR:
paq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PAGR_g3719
Transfer RNA biogenesis [BR:
paq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PAGR_g3719
Prokaryotic type
PAGR_g3719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AER34208
LinkDB
All DBs
Position
complement(4049816..4050760)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGMSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGNLVQTRPVTFTQSELDTALDSFRGDIM
QVPSMFSALKHQGRKLYEYAREGITIEREPRPITVYALQFIRWQGNELELDVHCSKGTYI
RTIIDDLGEKLGCGAHVIMLRRVQVARYPFEKMVTLEQLQALQHRASEAGEDLAQHLDPL
LLPMDSPASDYPAVNVSSDVAAYFKQGQPVHASQAPAQGLVRVTEGEEGKFIGMAEIAED
GRIAPRRLVVEYQN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcctcgtcgtcgcggtcgcgacgtccatggcgtcttattgctggataaacca
caagggatgtcatccaacgatgtcctgcaaaaggtcaagcgtattttcaacgctaaccgt
gcaggacataccggcgcgctcgatcctctggccaccggcatgttgccgatttgcctgggt
gaagccaccaagttttctcagtatctgctggactccgataagcgctatcgtgtgattgcc
cgcctgggtgaacgcaccgatacatccgatgcggacggcaatctggtgcagactcgtcct
gtgaccttcactcagtcagaactcgacacggcgctggacagttttcgtggcgatatcatg
caggtgccttccatgttttctgcactgaaacatcagggcagaaaactgtatgagtacgca
cgtgaaggcatcaccatcgaacgtgaaccccgcccgattaccgtttatgcgctgcagttt
attcgctggcagggcaatgagctggagctggacgtccactgttccaaaggcacctacatt
cgcaccattattgacgatctgggcgagaagcttggctgcggtgcgcacgtcatcatgctg
cgccgggtacaggttgcccgttatccgtttgagaagatggtcacactggagcagctccag
gcactgcagcatcgcgccagtgaggcaggtgaagatctggcgcagcaccttgatccgctg
cttctgccaatggacagcccggcgtccgattatccggcggttaacgtctcatccgatgtc
gccgcgtactttaagcagggtcagccggttcacgccagtcaggcgccagcccagggctta
gtccgcgtcaccgaaggtgaagagggcaaatttatcggcatggctgaaattgccgaggat
ggccgaattgctccccgccgtttagtggtggagtatcagaattaa
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