Pantoea ananatis PA13: PAGR_g3908
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Entry
PAGR_g3908 CDS
T01970
Name
(GenBank) putative HTH-type transcriptional regulator YiaJ
KO
K21602
IclR family transcriptional regulator, regulator of plant utilization
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paq03000
]
PAGR_g3908
Transcription factors [BR:
paq03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PAGR_g3908
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HVO_A0261_N
MarR
DcpS_C
TrmB
HTH_36
HTH_24
Med4
Rrf2
HTH_69
HTH_11
ANIS5_cation-bd
Fe_dep_repress
HTH_Crp_2
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AER34393
LinkDB
All DBs
Position
complement(4242026..4242838)
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AA seq
270 aa
AA seq
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MAVKVDKAKETKSDKPLGTQSLFRGLQLIELLSNYPNGCPLAHLAELSGMNKSTVHRLLQ
GLHSSGYVTQAPSPGSYRLTTKFISVGQKALSSLNIIHVAGPHLEKLNLDVGETVNFSSR
EDDHVVLINKLEPTTGMMRTRAYIGQHMPLYCSAMGKIFLAWGSEEYLLQYWQNHQDSIE
QLTKNTITTLPEMQQELNDILQQRTAMDREENELGVTCIAAPVFDIQQRVPYAVSVSLPT
AKLQQIGAKHLMAKVVATAQAISEELGFTA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaagtggataaagcaaaggaaacgaagagcgataaacccttagggacacaa
agcctgtttcgtggcctgcagttaatagaattgttaagtaattatcctaacggttgcccg
ctagcccatcttgctgaactgtctggaatgaacaaaagcaccgtacatcgcctgttgcag
gggctgcacagcagcggttacgtgacccaggcaccttcgcccgggagttaccgcttaacc
accaagtttatttcagtcggtcagaaggcgctgtcgtcgctcaatattattcacgttgca
gggccacatctggaaaaactcaacctggacgtgggtgaaaccgtgaacttctccagccgc
gaagacgatcacgttgtcttgatcaacaagttagaaccgactacgggcatgatgcgcacc
cgcgcctacatcggtcagcatatgccgctctactgttcagccatgggcaaaatttttctg
gcctggggcagcgaagagtacctgctgcaatactggcaaaaccatcaggacagcattgag
caactgacgaaaaataccattaccacgctgcccgagatgcagcaggaactcaacgatatt
cttcagcagcgcaccgcgatggatcgcgaagaaaatgaactgggcgtcacctgcattgcg
gcaccggtgttcgatattcagcagcgtgtcccttatgcggtttcggtatccctgccgacg
gccaagctgcagcagattggcgcgaagcatctgatggcgaaggtggttgccacggcgcag
gccatttcagaagagctgggcttcaccgcctga
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