Pantoea ananatis PA13: PAGR_g4077
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Entry
PAGR_g4077 CDS
T01970
Name
(GenBank) fatty oxidation complex alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
paq
Pantoea ananatis PA13
Pathway
paq00071
Fatty acid degradation
paq00280
Valine, leucine and isoleucine degradation
paq00310
Lysine degradation
paq00362
Benzoate degradation
paq00380
Tryptophan metabolism
paq00410
beta-Alanine metabolism
paq00640
Propanoate metabolism
paq00650
Butanoate metabolism
paq00907
Pinene, camphor and geraniol degradation
paq00930
Caprolactam degradation
paq01100
Metabolic pathways
paq01110
Biosynthesis of secondary metabolites
paq01120
Microbial metabolism in diverse environments
paq01200
Carbon metabolism
paq01212
Fatty acid metabolism
Module
paq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PAGR_g4077
00650 Butanoate metabolism
PAGR_g4077
09103 Lipid metabolism
00071 Fatty acid degradation
PAGR_g4077
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PAGR_g4077
00310 Lysine degradation
PAGR_g4077
00380 Tryptophan metabolism
PAGR_g4077
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PAGR_g4077
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PAGR_g4077
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PAGR_g4077
00930 Caprolactam degradation
PAGR_g4077
Enzymes [BR:
paq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PAGR_g4077
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PAGR_g4077
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PAGR_g4077
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PAGR_g4077
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AER34562
LinkDB
All DBs
Position
4455592..4457775
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGANLTLNQLDDGIVELVFDAPGSVNKLDTQTVASLGEAIAVLEQHADLRGVLLSSA
KPAFIVGADITEFLALFDAPTEKLSQWLTFANSIFNRLEDLPVPTIAAIDGYALGGGCEC
VLATDLRVATPTARLGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIDGMAALR
LGLVDAVVSPDKLRDAALTMLKAAASDGSWRARRAPKLAPLKLSPVEAAMSFTIAKGMVM
QTAGKHYPAPLTAVKTIEAAAALGRDDALKLETAAFVPLAQSDVARALVGIFLNDQYIKG
LAKKRSSENGAPKQAAVLGAGIMGGGISYQSAWKGVPVKMKDIHPQALTLGMNEASKLLN
KQLERGKIDGNKLAAVIATIQPTLDYAGFDQADVVVEAVVENPQIKASVLAETEKHMRSD
AILASNTSTIPISQLAQALQRPENFCGMHFFNPVPRMPLVEVVRGEKTSEATLGKVVAWA
SKMGKTPVVVNDCPGFFVNRVLFPYFAAFGMLLRDGADFRQIDKVMEKQFGWPMGPSWLL
DVVGIDTAHHAQSVMADGFPQRMKKDYRDAIDILFEAKRFGQKNGKGFWRWEEDKKGKPK
KVSDPEVDALLEPACQPKRIFSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYLDTLGNSNVVDQAKRYTALGGLYELPALLSEKARQHESWYPAVKPID
EAAFRSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgctaacctcactcttaatcagttggacgacggcattgtcgagctg
gtgtttgatgcccccggctccgttaataagctggatacacaaaccgttgccagcctcggc
gaagcgattgctgtgctggagcaacacgccgatctgcgcggcgtgcttctgagctcagct
aaacccgcctttatcgttggggctgacatcaccgaattccttgcgctttttgacgcgcca
acggaaaagctgagccagtggctgacgttcgcaaacagcatttttaatcgtctggaagat
ttacccgttcccaccatcgccgcgatcgatggctacgcgctgggcggtggctgtgaatgt
gttctggcgacggacttacgggttgccacgccaaccgcccgcctgggcttacctgaaacc
aagctgggcatcatgccgggttttggcggcagcgttcggctgcctcgcctgttgggtgct
gacagcgcgctggaaatcattgcggcaggtaaagatattgatggtatggctgcgctcagg
ctgggtctggtcgatgcagttgtcagccctgataaactgcgcgatgcagcgctgacaatg
cttaaagcggcagccagtgatggcagttggcgggcacgtcgcgcccctaaattagcgccg
ttaaaactcagccctgtcgaggccgcaatgagttttacgatcgctaaaggcatggtcatg
caaacggcagggaaacattatcctgcgccgctcaccgccgtgaagacgatcgaggccgca
gccgcattaggacgtgacgatgcgttaaaactggaaacggcggcgtttgttccgttggcg
caatcggatgtggctcgcgcgctcgtcggaattttcctcaacgatcagtacattaaaggg
ctggcaaaaaaacgcagcagcgaaaatggtgcgccgaagcaggctgccgtgctgggcgcc
gggattatgggtggcggcatcagctatcagtcggcgtggaaaggtgtgccggtcaagatg
aaggatattcatccgcaggcgctgaccctgggcatgaacgaagccagtaagcttctgaac
aagcagctggagcgaggtaagatagacgggaataagctggctgccgtcattgccaccatt
caacctacgctggattatgccggatttgatcaggccgatgtcgtggtcgaagccgtggtc
gaaaatccacagatcaaagccagtgtgctggctgaaacagaaaagcatatgcgcagtgat
gccatcctggcctcgaatacctctacgatccccatcagccagctggcgcaggcactgcag
cgtcccgaaaacttttgcggtatgcacttctttaatccggttccccgtatgccgctggta
gaagtggttcgcggagagaaaaccagtgaagcgacgttgggtaaagtcgtggcatgggcc
agcaagatgggcaaaacccctgtcgtggtgaatgactgtcctggcttcttcgtaaaccgt
gttctgttcccttactttgccgcgttcggcatgttgttgcgtgatggtgcggatttccgc
caaatcgataaagtgatggaaaaacagtttggctggccgatgggcccttcctggctgctg
gatgtcgtggggattgataccgcacatcatgcgcaaagcgtgatggcggatggtttccca
cagcgtatgaaaaaagactatcgcgatgctatcgatattctgtttgaagcaaaacgcttt
ggtcagaaaaacggtaaaggcttctggcgttgggaagaagacaaaaaagggaaacctaaa
aaagtctctgatcccgaggtcgatgcgctgcttgaacctgcctgccagcctaagcggatc
ttcagtgatgaagaaatcctgaaccgcatgatgttgccaatgctgaatgaagttgtccgc
tgtctggaagagaagattattgcttcacctgccgaggcagacatggcgctggtgtacggc
ctgggattcccgccattccgtggcggggctttccgttatctcgacacgctggggaacagt
aatgtcgtggatcaggcgaaacgctatacggcactgggcggcctgtatgagctgcctgcc
ctgctgtcagaaaaagcgcgccaacatgaaagctggtaccccgccgtcaaaccgattgat
gaagccgcgttcagaagcgcctga
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