Pantoea ananatis PA13: PAGR_p119
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Entry
PAGR_p119 CDS
T01970
Name
(GenBank) HTH-type transcriptional regulator YcdC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paq03000
]
PAGR_p119
Transcription factors [BR:
paq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PAGR_p119
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GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
AER34789
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Position
PAGR_p:complement(140205..141002)
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AA seq
265 aa
AA seq
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MLGCYQVVFINNAYDDSRLNAYLLCFWPCCVYQGNVVKPLSENPGSDAGENLAAKTPSKS
VTRRSRAVAAKRGAIMAAALEFFSLYGFHGTRLEQVAERADVSKTNLFYYFPSKEDLYIA
VLKGLLDIWLAPLKALQSDQHPLEAIREYIRLKLCVSRDHPQASRLFCLEMVQGAPLLKQ
ELGGSLKTLVEDKSDVIRGWIKDELIAPIDPMQLIFMLWATTQHYADFGVQVEAITGKTL
SDPVFFEQTVKSVQHIITEGIQIRA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgctaggttgttatcaggttgtgtttataaataacgcgtatgacgatagtcgccttaat
gcctatttgttatgcttttggccttgttgtgtgtatcagggaaatgttgtgaagccattg
tccgaaaacccgggatctgacgccggagaaaacctcgccgcgaaaacgccatcaaaatct
gtgacgcgacgttcgcgagcggttgctgccaaacgtggcgctatcatggccgctgcactg
gaattcttctcactgtatggctttcacggcacccgtcttgagcaggttgctgaacgcgcg
gatgtctcgaaaaccaatctgttctattactttccctcgaaagaagatttatacattgcg
gtgctcaaagggctgctggatatctggctggcaccgcttaaagcactgcagtccgatcag
catcctctggaagcaatacgggaatatattcgtctgaagctttgcgtctcccgtgaccat
cctcaggcctcaagattattttgtctggagatggttcagggcgcaccgctgctgaaacag
gagctgggcggcagcctgaaaacgctggtggaggataaatcggacgtgattcgcggctgg
attaaagatgagttgatcgcacccatcgatccgatgcagttgatttttatgctgtgggcc
accactcagcattacgcagattttggtgtgcaggttgaggcgattaccggtaaaacactc
agcgatcctgtgttttttgaacaaacggtgaagagtgtccagcacatcatcaccgaaggg
attcagattcgggcgtaa
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