Kinneretia aquatilis: K9V56_004565
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Entry
K9V56_004565 CDS
T09144
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
paqa
Kinneretia aquatilis
Pathway
paqa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paqa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K9V56_004565
09124 Replication and repair
03420 Nucleotide excision repair
K9V56_004565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqa03021
]
K9V56_004565
03036 Chromosome and associated proteins [BR:
paqa03036
]
K9V56_004565
03400 DNA repair and recombination proteins [BR:
paqa03400
]
K9V56_004565
Enzymes [BR:
paqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K9V56_004565
Transcription machinery [BR:
paqa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K9V56_004565
Chromosome and associated proteins [BR:
paqa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K9V56_004565
DNA repair and recombination proteins [BR:
paqa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K9V56_004565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
RACo_linker
T3SS_needle_E
Motif
Other DBs
NCBI-ProteinID:
WIV98774
LinkDB
All DBs
Position
1044818..1047151
Genome browser
AA seq
777 aa
AA seq
DB search
MSETAAAAELLVAVRALCEFSAKAGDLDLRFTPAPTALEGMAGHALVAGRRGSGYQTELS
LSGVFVATECGTRLRVRGRADGWDAGRQRLEEIKTHKGSLDAQPANHRALHWAQLKVYGA
LLCAQEGLARVELALVYFDVLAQSETVFAETHSAADLQAFFAEQCGRYVAWAQQEQAHRE
ARDAALLALAFPHAEFRRGQRSLAEGVYKAAVSGRVLLAQAPTGIGKTVGTIFPMLKAMP
GQKLDKLFFLTAKSSGRQLALEGMEKLKTSPGSLRVLELVARDKACEHPDKACHGESCPL
AQGFYDRLPQARAAAVQSGLALERAAVRALALAFEVCPYYLSQELVRWADVVVGDYNYFF
DSSALLHGLTQQNGWRVGLLADEAHNLLERGRKMYSAELEQDSLRGAKLVAPPSLKAPLD
RLQRAWTKLSKSMAGDEAAEPYQVLKELPEAWMQALQQATAAISEQQQAGSAKPLEPALQ
NFFFEALAFARLAEQLDAHSLCDLTLRNSNAPGFAKSQTKLHTTLAIRNIVPAPFLRPRL
LAAHTATLFSATVQPAGFYADLLGLPENWAYLEVESPFEAAQLEVKVARQISTRYADRQR
SLAALVAQIGAQFQARPGNYLAFFSSHDYLQQAAELFAREHPGVPLWPQARRMSEAEQQA
FLQRFTPESQGIGFVVLGGSFSEGVDLPGARLIGAFIATLGLPQVNPVNEQFRARLEQLK
GAGYDYTYLYPGLQKVVQAAGRVIRTTEDRGVIHLLDDRFARREVRALLPSWWRVEG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagaccgccgcagctgccgagctgctcgtcgccgttcgagccctgtgcgagttc
agtgccaaggccggcgatctggacctgcgcttcacgccggcacccacggcgttggagggc
atggccggccatgccctggtggccggccggcgcggcagcggctaccagaccgagctgagc
ctcagcggtgtgtttgttgcaacggagtgcggcacgcgcctgcgcgtgcgcggccgcgcc
gatggctgggacgccggccgccagcgcctggaggaaatcaagacccacaagggcagcctg
gacgcccagcccgccaaccaccgtgccctgcactgggctcagctcaaggtctacggcgcc
ctgctgtgcgcgcaggagggtctggcccgggtcgagctggccctggtgtacttcgacgtc
ttggcgcagagcgaaaccgtgtttgcggagacccacagcgccgctgatctgcaggcattc
tttgccgaacaatgcgggcgttatgtcgcttgggcgcagcaggagcaggcgcaccgtgag
gcgcgcgacgcggctttgctggccctggcttttccccatgccgaatttcgccgcggccaa
cgctccctggccgagggcgtctacaaggcggcggtctccggccgggtgctgctggcccaa
gcgcccaccggcatcggcaagacggtgggcaccatctttcccatgctcaaggccatgccg
ggccagaagctggacaagctgtttttcctgacggccaagagctccggtcgccagctggca
ttggaaggcatggagaagctcaagacctcaccgggcagcctgcgcgtgctggaactggtg
gcccgcgacaaggcctgcgagcaccccgacaaggcctgccacggcgagagctgcccgctg
gcccagggcttctacgaccgcctgccgcaggcccgcgccgccgccgtgcaaagcggtttg
gcgcttgagcgtgcggccgtgcgcgccctggccctggccttcgaggtctgcccctattac
ctgagccaggagctggtgcgctgggccgatgtggtggtcggcgactacaactacttcttc
gacagcagcgcgctcctgcatggcctgacccagcagaacggctggcgcgtgggcctgttg
gccgacgaggcgcacaacctgctcgagcgaggtcgcaagatgtactcggccgagctggaa
caagacagcttgcgtggcgccaagctggtggcgccgccctcgctgaaagcgccgctcgac
cgcctgcagcgggcctggaccaagctgagcaaaagcatggccggcgatgaagcggccgag
ccctaccaagtcttgaaggagctgcccgaggcctggatgcaggccttgcagcaagccacc
gccgccatcagcgagcaacaacaggcgggctcggccaagccgctggagccggcgctgcag
aacttcttcttcgaggccctggcctttgcccgcctggccgagcagctggatgcccactcg
ctctgcgacctgaccctgcgcaacagcaatgcccccggctttgccaagagccaaaccaag
ctgcacaccaccctggcgattcgcaacatcgtgcccgcgccctttttgcggccgcgcctg
ctggcggcccatacggccaccttgttctcggctacggtgcaacccgccggcttttatgcc
gacctgctgggcctgcccgagaactgggcctatctggaggtggaatcgccgtttgaggcg
gcgcagctggaggtgaaggtggcgcgccagatctcgacgcgctatgccgaccgccagcga
tccctggccgccctggtggcccagatcggcgcacagttccaggcccggcccggcaactac
ctggccttcttcagcagccacgactacctgcagcaggcggccgagctgttcgcccgggag
catcccggcgtgccgctctggccgcaggcgcggcgcatgagcgaggccgagcaacaggcc
tttctgcagcgcttcacgcccgaaagccagggcatcggctttgtggtgctcggcggctcc
ttctcggaaggcgtggacctgcccggcgcgcgcctgatcggcgccttcatcgccaccctg
ggcctgccccaggtcaacccggtcaacgagcagtttcgcgcccggctggaacaactcaag
ggtgcgggttacgactacacctacctctacccgggtctgcaaaaggtggtgcaggccgcc
ggccgcgtgatccgcaccaccgaagaccgcggcgtgatccatctgctggacgaccgcttt
gcgcggcgcgaggtgcgggccttgctgccgagctggtggcgggtggagggctga
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