Kinneretia aquatilis: K9V56_016945
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Entry
K9V56_016945 CDS
T09144
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
paqa
Kinneretia aquatilis
Brite
KEGG Orthology (KO) [BR:
paqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqa03021
]
K9V56_016945 (rpoH)
Transcription machinery [BR:
paqa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9V56_016945 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
DUF2390
Motif
Other DBs
NCBI-ProteinID:
WIV96702
LinkDB
All DBs
Position
4021264..4022184
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AA seq
306 aa
AA seq
DB search
MTLSTPTALTVRDPWSLVPSLGNLDAYISAVNRLPLLTPEEESSAARRLRDSGDLEAAGR
LVLSHLRLVVSISRQYLGYGLPQGDLIQEGNVGLMKAVKRYDPDQGVRLVSYAMHWIKAE
IHEYVLRNWRMVKVATTKAQRKLFFNLRSMKHSMKEDQADDQTHRNSLSEAQLAHVAREL
NVKPEEVLEMETRMSGGDVALEPQSDEDGESFAPIAYLADDSQEPTRVLEAQARDELAGD
GISRALEALDERSRRIVEERWLKVNDDSSGGMTLHELAAEYGVSAERIRQIEVAAMKKMR
KALSPA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactttgtctacacccactgctctgacggtccgtgacccctggtcgctggtgccctcg
ctcggcaacctggatgcatacatctccgccgtcaaccgcctgcccctgctgaccccggaa
gaggaaagctcggccgcccgccgtctgcgtgacagcggcgatctcgaggccgccggccgc
ctggtgctctcgcacctgcgcctggtggtgtcgatctcgcgccagtacctgggctatggc
ctgccccagggcgacctgatccaggaaggcaatgtcggcctgatgaaggccgtcaagcgc
tacgacccggaccagggcgtgcgtctggtcagctatgccatgcattggatcaaggccgag
atccacgaatacgtgctgcgcaactggcgcatggtcaaagtcgccacgaccaaggcccag
cgcaagctgttcttcaatctgcgctcgatgaagcacagcatgaaggaagaccaggccgac
gaccaaacccaccgcaacagtctcagcgaagcgcagctggcccatgtggcgcgcgaactg
aacgtcaagccggaagaagtgctggagatggaaacccgcatgtccggcggcgatgtggcg
ctcgagccgcaaagcgacgaggacggcgagagcttcgctcccatcgcctacctggccgac
gacagccaggagccgacccgcgtgctggaagcccaggcgcgcgacgagctggccggcgac
ggcatcagccgcgcgctggaagccctggacgagcgcagccgccgcatcgtcgaggagcgc
tggctcaaggtcaacgacgattcgtccggcggcatgaccctgcatgagctggcggccgag
tacggcgtgtcggccgagcgcatccgccagatcgaagtggcggccatgaagaagatgcgc
aaggcactcagcccggcctga
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