Kinneretia aquatilis: K9V56_017585
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Entry
K9V56_017585 CDS
T09144
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
paqa
Kinneretia aquatilis
Pathway
paqa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paqa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K9V56_017585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
paqa02022
]
K9V56_017585
02035 Bacterial motility proteins [BR:
paqa02035
]
K9V56_017585
Two-component system [BR:
paqa02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
K9V56_017585
Bacterial motility proteins [BR:
paqa02035
]
Pilus system
Twitching motility proteins
K9V56_017585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
AAA_16
AAA
HTH_28
AAA_7
DEC-1_N
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WIV96826
LinkDB
All DBs
Position
complement(4160946..4162532)
Genome browser
AA seq
528 aa
AA seq
DB search
MSMSSSSSSPAAVGPTHRLLVVDDEPDLRTLYELTLLREGYELETAGSVSEGLARLQAQS
YSAVITDMRLPDGSGLDLLHWLEQQGRGEKTLVITAYGSAENAVEALKAGAYDYLTKPVD
LRQFRLVVASALGRVPAAPPVVAKSPIAAPAAAPTAAPEPQASPVAKTPAPRVAAASVPA
SNSALSRLAGQSPAMQEVRALIDKVSRSMAPVLLQGESGTGKELVARAIHDSGVRARQRF
VAVNCGAIPEQLLEAEFFGYRKGAFTGAHEDREGFFQAADGGTLFLDEIGDLPLAMQSKL
LRSIQERSVRPVGAVVEAPVNVRILSATHKDLSAEVAAGRFRQDLFYRLNVIQLRVPPLR
ERIEDVAQIGERVLQRIAQDAGVSPVPRLSADALELLSRYAFPGNVRELENLLHRALALS
GGEWITAADLGLPEDVLDDSQLGAFDALEPAEAGVAPALGESDEALDQGQSQELPTDLAV
YLDEVEREILLRALARHRFNRTAAGAALGLSLRQIRYRMARLGITAGD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgagtagcagcagcagttcgcctgcagccgtcggccccacgcaccgcctcctg
gtggtcgatgacgaacccgatctgcgcacgctctacgagctgaccctgctgcgcgagggt
tatgagctggagaccgccggcagcgtcagcgaaggcctggcgcgcctgcaagcgcagagc
tacagcgccgtgatcaccgatatgcgcctgcccgatggcagcggcctggatctgctgcac
tggctggagcagcaaggccgtggcgagaagaccctggtgatcaccgcctacggctcggcc
gagaacgccgtcgaggcgctcaaggccggggcctacgattacctgaccaagccggtggac
ctgcgccagttccgcctggtggtggcctcggccttgggccgtgtgccggccgcgccgccg
gtggtggccaagtctccgatcgctgcacctgccgctgcgccgactgctgcccccgagcct
caggcatcacctgtggccaagacgccggcgccgcgggttgctgcagcgtccgtgccggcc
agcaactcggctctgtcccgtctggccgggcaatcaccggccatgcaggaggtgagggcc
ttgatcgacaaggtctcgcgcagcatggcgccggtgctcttgcagggcgagtcgggcacc
ggcaaggagctggtggcccgcgccatccatgacagcggtgtgcgggcgcgccagcgcttt
gtggccgtcaactgcggcgccatccccgagcagctgctggaggccgagttctttggctac
cgcaagggcgcgttcaccggcgcgcacgaagaccgcgagggcttcttccaggcggccgat
ggcggcaccttgttcctcgatgaaatcggcgatctgcccctggccatgcagagcaagctg
ctgcgttccatccaggagcgttcggtgcggccggtaggcgcggtggtggaggcgccggtc
aatgtgcgcatcctcagcgccacccacaaagacctcagcgccgaggtggccgccggacgc
ttccgccaggacttgttctaccgcctcaatgtgatccagctgcgcgtgccgccactgcgc
gaacgcatcgaggacgtggcccagatcggcgagcgggtgctgcagcgcattgcccaggat
gccggcgtgtcgccggtgccgcgcctcagcgccgatgcactcgagctgctcagccgctat
gccttccccggcaatgtgcgggagctggagaacctcctgcaccgcgccctggccctgtcg
ggcggcgagtggatcacggcggccgacctgggcctgcccgaggatgtgcttgatgattcg
cagctcggtgcgttcgatgcgctggagccggcggaggccggcgtggcgcctgcgctgggg
gaatcggatgaggcgctggaccaggggcagagccaagaactgccgaccgatctggccgtc
tacctggatgaggtggagcgcgagatcctgctgcgcgccctggcgcggcaccgcttcaac
cgcacagcggccggcgcggccctgggcctgagcctgcggcagatccgctaccgcatggcc
cgcctgggcatcacggcgggcgactga
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