Kinneretia aquatilis: K9V56_019920
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Entry
K9V56_019920 CDS
T09144
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
paqa
Kinneretia aquatilis
Brite
KEGG Orthology (KO) [BR:
paqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paqa03016
]
K9V56_019920
Enzymes [BR:
paqa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K9V56_019920
Transfer RNA biogenesis [BR:
paqa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K9V56_019920
Prokaryotic type
K9V56_019920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WIV97259
LinkDB
All DBs
Position
complement(4705439..4706461)
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AA seq
340 aa
AA seq
DB search
MTDVSSPYTTLPLWPKAYAASGASATLKLLNEDFTVTELPLQLPSGAGEHIWLDVEKNGA
NTAFVAQQLAAAAGVQEWDVGYAGLKDRYAITRQWFSIYLPKGETPDLTQLQHPEFKVLS
QSRHVKKLRPGDLQGNRFRIVLRDVVGDRAAIEANLQAVASQGVPNYFGAQRFGHEGGNV
EQGRAMLAREIRVRNPKKKGIYLSAVRSFVFNEVLALRIQQGLWGQALPGDVLDAAGRPT
GPLWGRGRVSSSEQAQALENGVAARHAALCEGMEHAGLDQERRALVASPGELSWDWPQAD
QLVLSFSLPAGNYATSVLNEILHTTEPERHTEGEPSAAVE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtctcatccccctacacgaccctgccgctgtggcccaaggcctatgcggcc
agcggtgccagcgccacgctgaagctcctcaacgaggacttcaccgtgaccgaactgccg
ctgcagctgccctcgggtgcgggcgagcacatctggctggacgtcgagaagaatggggcc
aacaccgccttcgtcgcgcagcagctggccgcggccgcaggtgtgcaggaatgggatgtg
ggctatgccgggctcaaggaccgctacgccatcacccgccagtggttcagcatctatctg
cccaagggtgagacccctgacctgacccagctccagcaccccgagttcaaggtgctgagc
cagagccgccatgtgaagaaactgcgccccggtgatcttcagggcaaccgattccgcatc
gtgctgcgagatgtggtgggcgatcgtgccgccatcgaagccaatctgcaggctgtggcc
tcccagggtgtgcccaattacttcggcgcgcagcgcttcggccatgagggcggcaatgtc
gagcaggggcgggccatgctggcgcgcgagatccgcgtgcgcaatccgaagaagaaaggc
atctacctgtcggcggtgcgctcttttgtcttcaatgaagtgctggccctgcgcatccag
caagggctttgggggcaggccttgcctggcgatgtgttggacgccgcgggccggccgacc
gggccgctctggggccggggacgtgtgagcagcagcgaacaggcgcaggcactggagaac
ggcgtggccgcccgtcatgccgcgctgtgcgagggcatggagcatgcgggtttggatcaa
gagcgccgcgccctggtggcgagcccgggtgagctgtcatgggattggccgcaggccgat
cagctggtgctcagcttcagcttgcccgctggaaactatgccacctcggtgctgaacgag
atcctccacaccacggagcccgagcggcacaccgagggcgagccgtctgcggcggttgag
tga
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