Kinneretia aquatilis: K9V56_023245
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Entry
K9V56_023245 CDS
T09144
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
paqa
Kinneretia aquatilis
Pathway
paqa00040
Pentose and glucuronate interconversions
paqa01100
Metabolic pathways
paqa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paqa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K9V56_023245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K9V56_023245
Enzymes [BR:
paqa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K9V56_023245
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Paralog
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
WIV97891
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Position
5506692..5507996
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AA seq
434 aa
AA seq
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MKPLRRSLLLILPACSLIACSVLPVERATTELSPWARSVLAPGDGWASLNGGTRGGADAA
AADVFTVSSRGELLAALSGPARPRIIQVRGRIDLSADAQGRPLQAEDFRDPAFSWPAFEA
AYAPATWGKVPPSGPLEEARLRSARRQSAHTTVRIPSDTTLVGLGPEAGFKNGMLLLDGV
QNIIVRGLHFSDAYDFFPAWDPKDNASGEWNSEYDNLSLRGARRVWVDHCTFDDGERPDR
AERWALGRPMQHHDGLLDITQQSDLVTVSWNHFRDHDKTHLIGSSDSRSEDAGHLRVSFH
HNHWERTQARTPRVRYGQVHLYNNLFSVPDLKTYDYSIGVGVQSRILSEANVWRSAPGLS
SRQLVKWWKGQHFADRGSLHNGQPVDLLAELRAANPGAVISADLGWQPVLAAPVEPAEQV
EARVLAGAGAGLAR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccctccgccgcagccttcttctcatcctgccggcctgcagcttgatcgcttgc
agcgtcctgccggtcgagcgcgccaccaccgaactcagcccctgggcccgcagcgtgctg
gcgcctggcgacggctgggcctccttgaacggcggcacgcgcggtggcgccgatgccgcc
gcggccgatgtgttcaccgtcagcagccgcggcgagctgctggcggcgctgagcggcccg
gccaggccgcgcatcatccaggtgcgcggtcgcatcgacctcagcgccgatgcacagggc
cggccgctgcaggccgaagacttccgcgacccggccttcagctggcccgcctttgaagcc
gcctacgccccggccacctggggcaaggtgccaccgagcgggccgctggaagaagcgcgg
ctgcgctcggcacgccggcaatcggcccacaccacggtgcgcattccttccgacaccacc
ctggtcggcctgggcccggaggccggcttcaagaacggcatgctgctgctggacggggtg
cagaacatcatcgtgcgcggcctgcatttctccgatgcctacgacttcttccccgcctgg
gaccccaaggacaatgccagcggcgagtggaactccgagtacgacaacctctcgctgcgc
ggggcgcggcgggtctgggtggaccactgcaccttcgacgacggcgagcgccccgaccgc
gccgagcgctgggccctgggccggcccatgcagcaccacgatggcctgctggacatcacc
cagcaatccgatctggtgaccgtcagctggaaccatttccgcgaccacgacaagacccat
ctgatcggcagcagcgacagccgcagcgaagacgccggccatctgcgcgtcagcttccac
cacaaccactgggagcgcacccaggcgcgcactccgcgggtgcgctacggtcaggtgcac
ctctacaacaatctgttcagcgtgccggacctgaaaacctatgactacagcatcggcgtg
ggcgtgcagtcgcgcatcctcagcgaggccaatgtctggcgcagcgcgccgggcctgtcg
agccggcagctggtgaagtggtggaagggccagcatttcgccgaccgcggctccttgcac
aacggccaaccggtggacctgctggccgagctgcgcgcggccaacccgggcgcggtgatt
tccgccgacctgggctggcagccggtgctggcggcgccggtcgagccggccgagcaggtc
gaggcccgagttcttgctggggccggggccgggctagcccggtag
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