Pseudemcibacter aquimaris: KW060_00185
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Entry
KW060_00185 CDS
T08836
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi03030
DNA replication
paqi03410
Base excision repair
paqi03420
Nucleotide excision repair
paqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KW060_00185 (polA)
03410 Base excision repair
KW060_00185 (polA)
03420 Nucleotide excision repair
KW060_00185 (polA)
03440 Homologous recombination
KW060_00185 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paqi03032
]
KW060_00185 (polA)
03400 DNA repair and recombination proteins [BR:
paqi03400
]
KW060_00185 (polA)
Enzymes [BR:
paqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KW060_00185 (polA)
DNA replication proteins [BR:
paqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KW060_00185 (polA)
DNA repair and recombination proteins [BR:
paqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KW060_00185 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KW060_00185 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WDU58689
LinkDB
All DBs
Position
complement(41921..44704)
Genome browser
AA seq
927 aa
AA seq
DB search
MSNDKHLYLIDGSSFIFRAYHAIRPLTRPDGTPVNAVSGFCNMLFKLLRDLDDSERPSHL
AVIFDAGKKTFRNDIYPEYKAHRPPAPDDLIPQFAIIHEAVEAFNLPSIQLEGYEADDII
ATYAKRAEAEGSKVTIVSTDKDLMQLVSEDVTMFDTMKNRHIGIEEVVEKFGLGPEKVIE
IQALAGDSADNIPGVPGIGVKTAALLLSEYGDLETLLERAGEIKQNKRRENLIENADLAR
VSLELVTLSTDVPDLPEISTMELGDIDPDKVLPFLEEQNFRSLQTRILTHLGPDVSAEFA
PIENAAPKEVNYETVTTMDALKRWIKICENERQVTIDTETTSVNAMAADLVGISLSVKSG
DACYIPLAHVSHSDEPADLLSEPTDQKLPDQIPMQEALDLLKPMLINPAILKIGQNIKYD
ALVLKKYDVAITPFDDTMLISYVLDAGVNKHSMDELAQVHLDHKTIPFKEIAGTGKKQIT
FDKVDVEKATEYAAEDADITGRLHRLLKPRLVQEKMVNVYETLERPLVPVLVDMEYNGIK
VDKDMLNRLSNEFAIRLSELESEIHDLAGHPFNIASPKQLGEVLFDEMGIPGGKKSKTGA
YSTGADILEKLAAEGHTLPERVLEWRALAKLKSTYTDALQNDINKDTGRIHTSYSLAATT
TGRLSSTDPNLQNIPIRSEEGRKIRNAFIPEKGYKLVAADYSQIELRLLAHIADLESLKN
AFNEGIDIHAMTASEVFGVPIEGMDPIVRRQAKAINFGIIYGISSFGLANQLGMSRGEAK
TFIDKYFERFPGIRHYMEDTKQFCRDKGYVETIFGRKIHIGSINDKNGMRRSFGERAAIN
APIQGSAADVIRRAMIRMPDALKDAGLNAKMLLQVHDELVFEVPEDELEKTTPIITSVME
KAALPALEISVPLTVDCGIGDNWNEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgacaaacatctctatcttattgacggatcaagttttattttcagggcttat
catgccatccgtccattaacccgtccggacggtacacccgttaacgcggtatccggtttt
tgtaatatgctgtttaaattattacgtgatcttgatgatagcgaacgcccaagccacctt
gccgttatttttgatgccggaaagaaaacattcagaaatgatatttacccggaatataaa
gcacaccgcccaccggcaccagatgatttaatcccacaatttgcgatcattcatgaggcc
gtcgaagcatttaacctgccctccatccagcttgaagggtatgaggccgatgatatcatc
gccacctatgcaaaacgcgcagaggcagaaggcagtaaagtaaccatcgtttccactgat
aaagatttgatgcagctggtcagcgaagatgtcaccatgtttgataccatgaaaaaccgc
cacatcggcattgaagaagtcgttgaaaaatttgggcttggtcctgaaaaagtcattgaa
attcaagcgcttgccggtgatagcgccgataacatcccgggtgtccccggtattggcgtc
aagacggcagcgttacttttatctgaatatggtgatctggaaacattgcttgaacgcgcg
ggggaaataaaacagaataaacgccgtgagaacctaatcgaaaatgcggatctcgcgcgt
gttagtcttgaactggtaaccctttccactgatgttcctgatctgccggaaattagtaca
atggaacttggtgatattgatccggataaagttttaccatttcttgaagaacaaaatttc
agaagcctgcaaacacggattcttacccaccttggccctgatgtatcagcagagtttgcc
cccatcgaaaatgccgcaccaaaagaagtgaactatgaaacggtgacgacgatggacgcc
ttaaagcgctggatcaaaatttgcgaaaacgaaagacaggtgaccattgatacggaaaca
acatcggttaatgccatggccgccgatcttgtcgggatatcattatccgtaaaaagcggg
gatgcctgttatatcccgcttgcccatgtaagccatagcgatgaaccggctgatttgtta
tcagaaccaacggatcaaaaattacctgaccaaattccaatgcaagaagcgttggatctg
ttaaaaccgatgcttattaacccggccattttaaaaatcggtcaaaatattaaatatgac
gcactggtccttaagaaatacgacgttgccatcacaccattcgatgacaccatgcttatt
tcatatgtgcttgatgcgggcgtcaataaacacagcatggatgaattggcgcaagttcat
ttggatcataaaacgattccgtttaaggaaatcgcaggaacaggcaaaaaacaaatcact
tttgataaagtagatgttgaaaaggcaaccgaatatgccgctgaagatgcggatattaca
ggacgtttacatcggctattaaaaccacgtcttgtgcaggaaaagatggtcaatgtttat
gaaacactcgagcgtccattggttccggtgcttgttgatatggaatataatggtatcaaa
gtcgataaagacatgctgaaccgtctttccaatgaattcgccatccgtcttagcgagctg
gaaagcgaaattcatgaccttgcgggccatccatttaatatcgcttcaccaaaacaactt
ggtgaagtgctgtttgatgaaatgggcattcccggcggcaaaaaaagtaagaccggcgcc
tatagcacaggcgcagatattctggaaaaactggctgcagaaggacatacgttaccagaa
agggttcttgaatggcgcgcacttgcgaaattgaaaagcacatatacggatgcgcttcaa
aacgatatcaataaagacacaggccgcattcacacgtcatattcactggcggcgacaacg
acagggcgactgtcatcaacggacccgaaccttcaaaatattccgatccggagcgaagaa
ggtcgcaaaatcagaaacgcttttattccggaaaaaggatataaactggttgctgctgac
tatagtcagattgaattaagattgctcgcacatattgccgatcttgaaagcctaaagaac
gctttcaacgaaggcattgatattcacgcaatgaccgcatccgaagtgttcggtgttccg
atcgaaggaatggacccgattgtaagacgtcaagccaaggcgattaactttggtatcata
tatggtatcagttcatttggccttgccaatcaattgggtatgagccgcggtgaagcaaaa
acattcatcgataaatatttcgaacgtttccctggcatccgtcactatatggaagacacc
aaacaattctgccgcgataaaggatatgtagaaaccatattcggccgcaaaatccatatt
ggcagcatcaacgataaaaatggcatgcgcagatcattcggtgagcgcgccgctattaac
gccccgatccaaggatcagccgccgatgtcattcgccgcgccatgattcgtatgccggac
gcattaaaagacgcaggattaaatgccaaaatgctgcttcaggtgcatgacgaactggta
ttcgaagtacccgaagatgaactggaaaaaacaacgccaatcattacaagcgtgatggaa
aaagcggcccttccggcactggaaatttccgtgccgttaaccgtggattgtggtattggt
gataactggaacgaagcgcattaa
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