Pseudemcibacter aquimaris: KW060_00435
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Entry
KW060_00435 CDS
T08836
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi03030
DNA replication
paqi03430
Mismatch repair
paqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KW060_00435 (holA)
03430 Mismatch repair
KW060_00435 (holA)
03440 Homologous recombination
KW060_00435 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paqi03032
]
KW060_00435 (holA)
03400 DNA repair and recombination proteins [BR:
paqi03400
]
KW060_00435 (holA)
Enzymes [BR:
paqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KW060_00435 (holA)
DNA replication proteins [BR:
paqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KW060_00435 (holA)
DNA repair and recombination proteins [BR:
paqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KW060_00435 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delta_C
Strumpellin
Motif
Other DBs
NCBI-ProteinID:
WDU58738
LinkDB
All DBs
Position
91713..92747
Genome browser
AA seq
344 aa
AA seq
DB search
MKIGYRDIDAQIKSLSPQYQAVLVFGPDEGLVRERATKIAKQVVEDLQDPFLVANLDPDT
LKSEPGILADEVAAISMMGGRRVIRVEGAAENTTKAATNFLENPVGDGLIVITAGNLRPT
SGLRKLFEKSKNAAAIPCYEDNQASLDALIHEVMRENGLSIDPDAASFLQMNLGSDRLVS
RSELNKLAIYMGPQGKRESDMVTLDDVAKCVGDSGALSIDTITSATISGDLKRLDDTLFK
AFNRGENAIAVLRSLSRKINRMHLARGYMDQGFSADQAMGKLVPKVFAMEARRFKADLSK
WTTGRLASAMSITSAAEEDCKTTGMPVEAICARACLRIANAAKR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggctaccgtgatattgatgcgcagattaaatccctgtcaccacaatatcag
gcggtattggtctttggcccggatgaaggacttgttagagaacgtgcaacgaaaattgcc
aaacaggtggttgaagatcttcaagatccatttctggtcgcgaaccttgaccctgataca
ttgaaatctgaaccgggtatccttgctgatgaagtagctgccatttcaatgatgggcggc
aggcgcgtaatccgtgttgaaggtgcagctgaaaacacaacaaaggccgcaacaaatttc
cttgaaaatccggttggggatggactgattgttatcacagcaggtaatttaaggcccaca
tcggggcttcggaaactttttgaaaaatcaaaaaatgctgccgctattccttgttatgaa
gataaccaagcatcacttgatgcacttattcatgaagtcatgcgggaaaatggattatcc
attgatcccgatgcggcgtcatttttacaaatgaatcttggcagtgacagacttgtttcc
agaagcgagcttaataaacttgctatttatatggggccacaaggcaaacgtgaaagcgat
atggtgacgcttgatgatgtggcgaaatgtgttggtgatagcggtgcacttagcattgac
acgatcacaagtgccacaatcagtggtgatttgaaacggcttgatgacacgctttttaaa
gcctttaaccgcggcgaaaatgcaattgcggtgcttaggtcgttatccagaaaaattaac
cgtatgcatctcgcacgcggctatatggaccaggggttttctgcggatcaagccatggga
aaactcgtgccaaaagtattcgcgatggaagcccgcagatttaaagcggatctttcaaaa
tggacgactggcagacttgccagtgccatgtcgattacatctgccgcagaagaagactgt
aaaaccacaggcatgccggttgaggcgatatgcgcacgtgcttgtcttcgtattgccaac
gctgcgaaacgataa
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