Pseudemcibacter aquimaris: KW060_01525
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Entry
KW060_01525 CDS
T08836
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
paqi
Pseudemcibacter aquimaris
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqi03021
]
KW060_01525 (rpoH)
Transcription machinery [BR:
paqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KW060_01525 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
WDU58954
LinkDB
All DBs
Position
complement(329817..330710)
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AA seq
297 aa
AA seq
DB search
MAQNNLPTISPDGSLTSYLHEIRKFPMLKPDEEFMLAKAWTEHGDTDSAHKLVTSHLRLV
AKIAMGYRGYGLPLGDLISEGNVGMMQAVKRFDPDKGFRLATYAMWWIKASIHEYILRSW
SLVKIGTTAAQKKLFFNLRRIKGQLEAVDDGDLHPDQVTEIANKLDVKEDEVVQMNRRMS
GGDHSLNAPMKADIEGEWQDWLVDEDTPDQETAYADAEEMDYRRGLMADAMSALNEREQH
IIAERRLSDSPKTLEELSIEYNISRERVRQIEARAFEKLQQAMQSAAAEDNMITIDQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaataacctaccgacaatatcgccggatggaagtttaacgagctatctgcat
gaaatccgtaaattcccaatgcttaagccagacgaggaatttatgctcgccaaagcatgg
acggaacacggtgatacggattccgcgcataagcttgtgacatcacatctgcgtcttgtg
gcgaaaatcgccatgggatatcgcgggtatggtttgccactgggtgacctgatttcagaa
ggtaacgtcggcatgatgcaggcggtaaaacgttttgaccctgataaagggttccgactt
gccacgtacgccatgtggtggattaaagcatccattcatgaatatatcctgcgttcatgg
tcgcttgttaaaatcggcacgaccgccgcacagaaaaaattattctttaacctacgccgt
attaaaggccagcttgaagcggttgatgatggtgaccttcacccggatcaggtgacggaa
atcgccaacaagcttgatgttaaagaagacgaagttgtgcaaatgaaccgccgtatgtcc
ggtggtgatcattccctgaatgcgccaatgaaagccgatattgagggcgaatggcaggac
tggcttgttgatgaagacacaccagatcaggaaacggcctatgctgatgcggaagaaatg
gattatcgccgcggattgatggccgatgccatgagcgcgcttaatgaacgtgaacagcat
attattgctgaacgtcgtctaagcgatagcccaaaaacgctggaagagctaagcatcgaa
tataacatcagccgtgaacgcgttcgtcagatcgaagcacgcgcgtttgaaaagctgcag
caagccatgcaaagtgctgcagccgaagacaatatgattacgattgatcagtaa
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