Pseudemcibacter aquimaris: KW060_02045
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Entry
KW060_02045 CDS
T08836
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KW060_02045 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqi03400
]
KW060_02045 (xseA)
Enzymes [BR:
paqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KW060_02045 (xseA)
DNA repair and recombination proteins [BR:
paqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KW060_02045 (xseA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
SAM_ARHGAP18_N
Motif
Other DBs
NCBI-ProteinID:
WDU59050
LinkDB
All DBs
Position
425112..426536
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AA seq
474 aa
AA seq
DB search
MSDYPYSSNNSPTNAQEYSVTEVSLALKRTVEDQFGYVRIRGEISGSKRAASGHVYLALK
DDKSVLDGVMWKGVAGKLTFRPEDGLEVVVTGKLTTYPGRSKYQIVIDKMEVAGEGALMA
LLEKRKKELAAEGLFDPARKLLIPYLPKVIGVVTSPTGSVIRDILHRLSDRFPRHVLVWP
VLVQGEGAQTQIAEAIDGFNALEEGGEIPKPDVLIVARGGGSLEDLWCFNEEEVVRAVSR
SDIPLISAVGHETDTTLIDYVADLRAPTPTAAAEKAVPVRADLIYTVRDLDTRHEKAIRR
RINELNERVEGLGRGLPKPSELLGLASQRFDEMSDRLPRALKVGVERQSMRLDGIGRMLR
PESIISDMKRKDDQLNVLEERMNRAIENRIGAKRSEYESPARLLESLSYHRVLERGFAVI
RDEKGKAISEGKGIAKGAALGVEFRDGVVDVVRAGKPAPKKKKQAEKPEQGTLL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattatccttattcatcaaataattcaccaacaaatgcgcaggaatattccgtt
acggaagtaagtcttgctttaaaaagaaccgttgaagaccagttcggctacgttagaatc
aggggggaaatttccggcagtaaacgcgcagcgtctggtcatgtttatcttgcgcttaag
gatgataaatccgtgctggatggcgttatgtggaaaggggttgctggaaaactgacattc
cgccctgaagacggccttgaagtggtggtcacaggaaagcttacgacatatcccggtaga
tcgaaataccagatcgtcattgataaaatggaagtcgccggtgaaggggcgcttatggcg
cttttggaaaaaaggaaaaaagaactggccgcagaagggctatttgatccggcccgtaaa
cttctcattccatatttgccaaaagtcattggcgttgtaacgtcgccaacgggttccgta
atacgtgatattttacatcgtctatcggaccgtttcccaagacatgtgcttgtttggccg
gttcttgttcaaggtgagggggcacaaacccaaattgcagaagccattgacggttttaat
gcccttgaagagggtggcgaaattccaaaacccgatgtgcttattgtcgcccgtggtggt
ggtagtcttgaggatttatggtgctttaacgaagaagaggtcgtgcgtgcggtctcgagg
tcggatattccgctaatttcagcggtgggtcatgaaacagatacaacactaattgattat
gtagcggaccttcgtgcaccaacgccaacggctgcagccgaaaaagccgtgcccgtacgt
gcggatttgatttatacagtccgtgatttggatacccgccatgaaaaagccataagacgg
cgtattaatgaacttaatgaacgcgttgaagggcttggaagaggcctgccgaaaccatca
gaactgttgggtcttgcaagtcaacgttttgatgaaatgagtgaccgtttaccacgtgca
cttaaagttggtgttgaaaggcaatctatgcgccttgatggtattggtcgtatgttacgc
ccggaatcaattatttcggatatgaaacgaaaagatgatcaattaaacgtcttagaagaa
agaatgaacagggcaattgaaaatagaataggcgccaaaagaagcgaatatgaaagcccg
gcaagacttcttgaaagtttaagttatcatcgtgtgcttgaacgtggttttgcggttatc
cgtgatgaaaaaggaaaagccatcagcgaaggtaagggaattgcaaaaggcgcagcacta
ggtgtcgaattccgtgatggcgtcgttgatgtggtaagggcaggaaagcccgcgccgaag
aaaaagaaacaggcagaaaaacctgaacaaggtacattattatga
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