Pseudemcibacter aquimaris: KW060_02680
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Entry
KW060_02680 CDS
T08836
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi00550
Peptidoglycan biosynthesis
paqi01100
Metabolic pathways
paqi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KW060_02680 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KW060_02680 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paqi01011
]
KW060_02680 (mrdA)
Enzymes [BR:
paqi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KW060_02680 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
paqi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KW060_02680 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WDU59173
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All DBs
Position
571205..573064
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AA seq
619 aa
AA seq
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MKSSDKNKMKMYTRRATLVSAGMMLLSSALVGRMYYLQVTSRSKYELLAEENRISVRLLA
PTRGDIVDRYGNPFATSTTDYRINVIPEETEGLQETLDAIGAYIPISERDNERIIRASKK
QRSFLPINVANNLDWETFSKMNVNMPDLPGIQPDMGTTRFYPQRELGAHIIGYVGAVNEQ
ELQNDSDPLLELPDFKIGKNGIERVLDDRLRGGAGNSQVEVNVLGRVIRELERQDPEPGN
QARLTLDLEMQSFIAERLKDDTAGAVVMDIHTGEIHAIVSNPSFDPNDFNGGISQVKWDA
LRNDIRKPLVNKPVSGQYSPGSTFKMIVALAGLEDGIITAEDTKYCGYRYPFGDRVFHCW
NKNGHGDINLVQALAQSCDVYFYRLARELGIDKIHAMAARFGIGERFNIGIMSEARGINP
NGSWKFGMVGERWQGGDTINVGIGQGYVSTTALQLAVMTSRLANGGKMVYPKIYFDENNN
TVPEDMGINPDHLDVVLKGMEDVYYHQRGTGFRYRLRNKDYKLGGKSGTTQVRGISAAER
AAGVIDNEDLEWAKRDHGLFVAYGPTENPKYAVSVLLEHGGGGGFAAPVARDILEYVIDR
DIERNQQTNQQPSMSGQPV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtctgacaaaaataagatgaaaatgtacacacgccgcgcgacattggttagt
gcgggcatgatgttgctttcgtctgcgcttgtcggacggatgtattatttgcaagttaca
agccgcagtaaatatgaactgctcgcggaagaaaaccgaattagcgttcgcttgcttgcg
ccaacacgaggggacattgttgatcgttacggaaacccttttgcgaccagcacgaccgat
taccgcatcaatgtgatccctgaagaaacagaagggttacaggaaacactggatgctatt
ggtgcctatattccaatttctgaacgtgataatgaacgcataatcagggcatcgaaaaaa
cagcgatccttccttccgattaatgtggctaataatctggattgggaaacattttccaaa
atgaatgtgaatatgccggacttgccgggtattcaaccggatatgggaacgacaagattt
tatcctcaacgggaacttggtgcacatatcatcggatatgtcggcgccgtcaatgaacaa
gaattacaaaatgatagtgacccgttattggagttaccggattttaaaatcggcaaaaac
ggtattgaaagggttcttgatgacaggttgcgtggtggcgcaggaaacagccaggtagag
gttaatgtacttggccgtgtgatccgtgaactggaaagacaagatcctgagcccggcaat
caggcgcgtctaacacttgatctggaaatgcaaagctttattgcggaacggttaaaagat
gatactgccggcgctgtggtgatggatattcatactggtgaaattcatgcgattgtgtct
aacccttcgtttgatccaaatgattttaatggtggtatcagtcaggttaaatgggatgcg
cttagaaatgatattcgtaaaccgctcgtgaataaaccggtcagtggccaatattcaccg
ggttccacatttaaaatgattgtggcacttgccggacttgaggacggtattatcacagca
gaagatacgaaatattgcggttaccgttatccatttggggatcgggtattccattgctgg
aataaaaatggccatggagatatcaatttggtgcaagcacttgcgcaaagttgtgacgtt
tatttttatcgattagcgcgtgaacttggcatcgataaaattcatgcaatggccgcgcgt
ttcggtattggagaacgttttaacatcggcattatgtcagaagcaagagggatcaacccc
aacggcagttggaaattcggtatggtcggtgaacgttggcaaggtggcgataccatcaat
gtgggcatcgggcaagggtatgtttcaaccaccgctcttcagcttgccgtcatgacgtca
cgtctcgccaatggtggcaagatggtttatccgaaaatttattttgatgagaataacaac
accgttccagaagatatggggattaatccagaccatcttgatgttgtcttaaagggtatg
gaagatgtttattaccaccagcggggtacaggtttccgctataggttaagaaataaagat
tataaactgggtggtaaatcgggcacgacgcaggtaaggggtatttccgccgcagaacgc
gctgcaggcgtaattgataacgaagaccttgaatgggctaaacgggatcatggcttattt
gtcgcgtatggcccaacagaaaatccaaaatatgcagtttccgtgctattggaacatggt
ggtggtggtggttttgccgcgcccgtggcgcgcgatattctggagtatgttattgaccgc
gacattgaacgcaatcaacaaactaatcagcaaccaagtatgtcaggacaacccgtataa
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