Pseudemcibacter aquimaris: KW060_04315
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Entry
KW060_04315 CDS
T08836
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
paqi
Pseudemcibacter aquimaris
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KW060_04315 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paqi03019
]
KW060_04315 (rnc)
03009 Ribosome biogenesis [BR:
paqi03009
]
KW060_04315 (rnc)
03036 Chromosome and associated proteins [BR:
paqi03036
]
KW060_04315 (rnc)
Enzymes [BR:
paqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KW060_04315 (rnc)
Messenger RNA biogenesis [BR:
paqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KW060_04315 (rnc)
Ribosome biogenesis [BR:
paqi03009
]
Eukaryotic type
90S particles
RNase
KW060_04315 (rnc)
Prokaryotic type
rRNA processing factors
KW060_04315 (rnc)
Chromosome and associated proteins [BR:
paqi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KW060_04315 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
DUF761
Motif
Other DBs
NCBI-ProteinID:
WDU59482
LinkDB
All DBs
Position
892461..893153
Genome browser
AA seq
230 aa
AA seq
DB search
MTVENGQYSELYEIIGYSFKNEELIREALTHPSLEGAKNYQRLEFVGDRVLGLAIAAWMF
ELYPDVDEGGLASRHTNLVRREACAKVGEEIGLGDFIHMAKSSEDTGGRKRETIIADVSE
SIIGAIYLDANYQEAEKFIRKFWKDQAYNVKVAKRDAKTRLQELVQSKGKPTPNYVTVDK
EGPDHQPVFTIALRVKGEEEEQAKGKSKREAEQNAAEAMLERLEKAWNVK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttgacagttgaaaacggtcaatattcagagctttatgaaatcattggatattcatttaag
aatgaagaattaataagagaagcattgacgcatccaagtttggaaggtgcgaaaaattac
caaagattggaattcgttggcgaccgtgtgcttggtcttgccattgctgcgtggatgttt
gaactttatcctgatgttgatgaaggcggtcttgcgagccgtcacacaaatcttgtaaga
cgcgaagcatgcgcaaaagttggtgaggaaattggccttggtgattttattcatatggcc
aaaagcagcgaagataccggcggaagaaaacgtgaaaccattatcgcggatgttagtgaa
tcaatcattggtgccatttatcttgatgctaactatcaagaagccgaaaaatttatccgt
aaattttggaaagatcaggcttataatgtaaaagttgcaaaacgcgatgcaaaaacaaga
ttgcaggagcttgtgcaatctaaagggaagccaaccccaaattatgtgacggtcgataaa
gaagggccggatcatcagcctgtattcacaatagccttaagggttaagggggaagaagaa
gagcaggcaaaaggaaaatcaaaacgcgaagccgaacagaatgcagcggaagccatgctg
gaacgtttggaaaaggcgtggaacgtaaaatga
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