Pseudemcibacter aquimaris: KW060_05300
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Entry
KW060_05300 CDS
T08836
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
paqi
Pseudemcibacter aquimaris
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paqi03032
]
KW060_05300
03036 Chromosome and associated proteins [BR:
paqi03036
]
KW060_05300
03400 DNA repair and recombination proteins [BR:
paqi03400
]
KW060_05300
DNA replication proteins [BR:
paqi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KW060_05300
Chromosome and associated proteins [BR:
paqi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KW060_05300
DNA repair and recombination proteins [BR:
paqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KW060_05300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
2C_adapt
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WDU59673
LinkDB
All DBs
Position
1073662..1073937
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVNSVAEAAGLSKADAAGAVDGVFNTIMGTLAGGDEVRLVGFGTFSVAQRAASEG
RNPRTGEKIQIPASKQPKFKAGKALKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgaactcgtaaacagcgttgcggaagcagcaggtctatcaaaagcagat
gcagctggtgcagtagacggcgtatttaacacaatcatgggcacactagcaggtggcgat
gaagtacgtcttgttggtttcggtacattcagcgtagcacaacgtgctgcttctgaaggt
cgtaacccacgtactggtgaaaaaattcaaattccagcttctaagcaacctaaatttaaa
gcaggtaaagctcttaaagacgctgtgaacaagtaa
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