Pseudemcibacter aquimaris: KW060_05530
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Entry
KW060_05530 CDS
T08836
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KW060_05530 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqi03400
]
KW060_05530 (uvrB)
DNA repair and recombination proteins [BR:
paqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KW060_05530 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KW060_05530 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
Kinesin
DUF87
AAA_5
Microtub_bd
Phage_Mu_Gp48
Motif
Other DBs
NCBI-ProteinID:
WDU59715
LinkDB
All DBs
Position
complement(1121947..1124142)
Genome browser
AA seq
731 aa
AA seq
DB search
MIREYDETSPTVQRPREYYDRPAKTEGGIKFKIESEFKPSGDQPKAIEALVDGLDSGLTD
QVLLGVTGSGKTYTMAQIIERTQRPALIMAHNKTLAAQLYGEMKSFFPNNSVEYFVSYYD
YYQPEAYVPRSDTFIEKDASINESIDRMRHAATRAIFERDDVIIVASVSCIYGMGAAETY
LQMSILFEQGMLYDQRQLLRDLVELQYKRNDMAFTRGSFRVRGDVIEIFPSHFEDRAWRL
DFFGDELEKITQFDPLTGEKVEDLQSVKLYANSHYVTPGPSMDQAIKTIKAELEQTLKEY
QARGMVLEAARLEQRTKFDLEMLTATGLCAGIENYSRHLTGRLSGEAPPTLFEYLPENML
LFMDESHVSVPQIGGMSRGDYARKSTLAQYGFRLPSCLDNRPLKFEEWQYFRPQSIYVSA
TPGTWELEQTDGEFVEQVIRPTGLTDPPVEIRPVESQVDDVMHEARDAIAKGHRVLVTTL
TKRMAEDLTEYMHDSGLKVRYMHSDIDTLERIEIIRDLRLGVFDVLVGINLLREGLDIPE
TGLVAILDADKEGFLRSTTSLIQTIGRAARNVDSHVILYADKETNSIKAAMAETDRRRAI
QEAYNEEHGITPASIKKSIDDIIGDTAEGDHVTVELDTTDTNNMVGHNLRSYIEDLEKTM
LDAAANLEFEEAARLRDEIKRLEEKELGLDFDPMARNIGASPARDKGRSTSGKPGTRQYR
KKSNKATPRKF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagaatatgacgaaacatcccccacggtccaaagaccccgtgaatattatgac
cgcccggcaaagaccgaaggcggcattaaattcaaaattgaaagcgaatttaagccatca
ggtgatcaaccgaaagccatcgaagcattggtagatggcttggatagtggccttaccgat
caagtactgcttggtgttaccggatccggtaaaacatacaccatggcgcagattattgaa
cgcacacagcgccctgccctgattatggctcataacaaaacactggccgcccagctttac
ggggaaatgaaaagcttttttccaaataattcggtggaatatttcgtatcctattatgat
tattatcaaccagaggcctacgtaccgcgttcagatacttttattgaaaaagacgcaagc
atcaacgaaagcatcgaccgtatgcgccatgcggcgacccgtgcgatctttgaacgcgat
gacgtgatcattgtcgccagtgtatcctgcatttacggtatgggcgcggcggaaacatat
cttcaaatgtcgatcctgtttgaacaaggcatgttatatgatcagcgccagttgctacgt
gatttagtggaacttcaatataaacgcaatgacatggcctttacccgcggcagtttccgt
gttcgcggtgatgtaattgaaatattcccaagccatttcgaagaccgcgcctggcggctt
gatttctttggagatgagcttgaaaaaatcacccagtttgacccgctcactggtgaaaag
gtagaggacctacaaagtgtgaagctatatgccaatagccactatgtcacacccggccca
agtatggaccaagccatcaaaaccattaaggcggaactggaacaaacgttaaaagaatat
caagcccgcggcatggtgcttgaagcagcccgtcttgaacaacgcaccaaatttgatctt
gaaatgctgaccgcaacgggcctttgtgccggtattgaaaattatagccgccacttaact
gggcgactgtccggcgaagctccgccgacactatttgaatatttaccggaaaatatgctt
ttgtttatggacgaaagccacgtaagcgttccgcaaatcggtggcatgtcccgtggtgac
tatgcccgtaaaagcacactggctcaatacggtttccgtcttccaagctgtcttgataat
cgcccacttaagtttgaagaatggcaatattttagaccccaatcaatttacgtatccgca
acgcccggcacatgggaactggaacaaaccgatggcgaatttgttgaacaggtgatccgt
ccaaccggccttaccgatccacccgttgaaatcagacccgttgaaagccaggttgacgat
gtaatgcatgaagcaagagatgcaattgcaaagggccaccgcgtgcttgtcaccacacta
accaaacgcatggctgaagaccttaccgaatatatgcatgatagcggccttaaagtcagg
tacatgcattctgatatcgacaccttggaacgtattgaaatcattcgtgatttacgcctt
ggtgtatttgatgtacttgtgggaattaacctgttgcgtgaaggtttggatatcccggaa
accggccttgttgcaattcttgatgccgataaagagggcttcctgcgttcaaccacatca
ttaatccagaccatcggccgcgccgcccgtaatgtcgatagccatgttattctttacgcc
gataaagaaaccaacagcattaaagccgcgatggcggaaaccgatcgccgccgcgccatt
caagaagcctataacgaagaacacggcattacaccggcaagcatcaagaaatcaattgac
gatatcatcggcgacaccgcagagggcgaccacgtcaccgtagagctagacaccacagac
accaacaatatggtcggtcataatctgcgcagttatatcgaagaccttgaaaaaacaatg
ctggatgctgccgcgaaccttgaatttgaagaagcagcgcgactgcgcgatgaaatcaaa
cgactagaggaaaaagagctcggtcttgattttgatccaatggcaagaaacataggcgca
agcccagcccgcgataaaggcagatcaacatccggcaaacccggtacccgccagtataga
aagaaaagcaacaaagcgaccccaagaaagttttaa
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