Pseudemcibacter aquimaris: KW060_05960
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Entry
KW060_05960 CDS
T08836
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi00550
Peptidoglycan biosynthesis
paqi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KW060_05960
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paqi01002
]
KW060_05960
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paqi01011
]
KW060_05960
Enzymes [BR:
paqi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KW060_05960
Peptidases and inhibitors [BR:
paqi01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
KW060_05960
Peptidoglycan biosynthesis and degradation proteins [BR:
paqi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
KW060_05960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
WDU59798
LinkDB
All DBs
Position
1224174..1225361
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AA seq
395 aa
AA seq
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MNKMTMKKSFKLLAFTGLATVTAMGGAFAQTFSSPAKQAILIEASTGDVLFEKNADEQMT
PSSMSKLMTVYIAFQQLKSGALSLDDEYYVENTPDWQQWRNTSTQDRGSTMYVNAGDTVT
IGDLLRGIIVQSGNDACVQLALAIAGDVGVFVNMMNDEAGRLGLTASNFVNTNGWPDPDH
YMSARDIATLSLALATEFPEYYSMFAEKQFSYAGVNQPNRNRLLYRMEGADGLKTGHTEA
GGYGLASSAVSEDRRLVLVVNGMTSDNARVGESTRLLNYGFRNFGIYDMLKAGQVIDEAN
VWLGEEATVPLVAEEGVTLSMNRQARRNMTAKVVYDGPIPAPIQAGQPIATLELSAEGME
TKSYPLVAGKDVEVLGGMSRIKAALGYMIMGSTGD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatgacaatgaaaaaatcatttaagcttcttgcttttaccgggcttgcgaca
gttacggcaatggggggtgcttttgcgcaaacattttcaagccctgcgaaacaggcgata
ttgatcgaagcatccacaggtgatgtattattcgaaaaaaatgctgatgagcaaatgacg
ccttcatccatgagcaagctgatgactgtttatatcgcttttcaacagttaaaaagcggc
gcattaagtctggatgatgaatattatgttgaaaatacaccggactggcagcaatggcgc
aacaccagcacacaggaccgtgggtcaaccatgtatgtgaatgcaggtgatactgttacc
attggtgatcttctacgtggtatcattgttcaatctggtaatgatgcatgcgtacagctt
gcgctggcgattgcgggtgatgttggtgtttttgtcaatatgatgaatgatgaagcagga
cgtcttggtttaacggcaagtaatttcgttaacacaaacggctggcctgaccctgaccat
tatatgtccgcacgtgatattgcgacattgtcattagcacttgcgacagaatttcctgaa
tattattcaatgtttgctgaaaaacagtttagttatgcgggggtaaaccagccaaaccgt
aaccgtcttttataccgcatggaaggggccgatggccttaaaaccggacatacagaggcc
ggtggatatggccttgcgtcatctgcggtgagtgaagatcgtcgtttggtgctcgttgtc
aatggtatgacaagcgataatgcccgtgttggtgaatcaacaagacttctgaattatggt
tttcgcaattttggcatctatgacatgctgaaggccggacaagttattgatgaagccaac
gtttggcttggtgaagaggcaaccgtaccacttgtcgcagaagagggcgtaacgctttca
atgaacaggcaagcccgccgtaatatgaccgccaaagtggtttatgatggcccaatcccg
gcaccaattcaggcggggcaaccaattgctacgcttgaactttcagcagagggcatggaa
acaaaatcatatccgcttgttgctggaaaagatgttgaggttcttggtggtatgagccgg
attaaagcggcattaggttacatgattatgggttcaacgggtgactga
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