Pseudemcibacter aquimaris: KW060_08920
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Entry
KW060_08920 CDS
T08836
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
paqi
Pseudemcibacter aquimaris
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqi03400
]
KW060_08920 (radA)
DNA repair and recombination proteins [BR:
paqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KW060_08920 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_24
SLFN-g3_helicase
RecA
AAA_16
AAA
NTPase_1
nSTAND3
ABC_tran
GvpD_P-loop
ATPase_2
MCM
HepII_C
Baculo_p47
AAA_14
NACHT
Motif
Other DBs
NCBI-ProteinID:
WDU57319
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Position
1884322..1885695
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AA seq
457 aa
AA seq
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MARPKRIYVCNSCGSTYSKWAGQCEGCGEWNTLTEEASENSPTGLGKSSNAKGNIIELSA
LKGEDEALPRMKSGIGEFDRVTGGGLVPGSAILIGGDPGIGKSTILLQSMSKLADGGHKT
VYISGEESVAQVRMRAKRLGLAESNVELGSETNLRDILATLSKGDCPDVVVIDSIQTMYA
DTIESAPGTVAQVRTSAQELIRFAKKKNVCVLLVGHVTKDGQIAGPRVMEHMVDTVLYFE
GDRGHQFRILRAVKNRFGGTDEIGVFEMGELGLSEVSNPSALFLGDRDGDVVGSAVFAGM
EGSRPMLVEVQALVAQSSLGTPRRAVVGWDSARLAMIIAVLDARCGLGLGAFDIYLNVAG
GLKISEPAADLAVAAALISSLSGDPIAEETVIFGEIALSGEIRPVGQADARLKEAEKLGF
TQAFIPSKMKFKNKKIKTAELDQLIKLVDIIAPNLGE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaccaaaacgcatttatgtttgtaattcatgcggcagcacatattcaaaatgg
gcgggccaatgcgaagggtgcggcgaatggaatacccttactgaggaagcatcggaaaac
agccctaccggccttggcaaatcatcaaacgccaaaggcaacatcattgaattatccgca
ttaaagggcgaagacgaagccctgccccgaatgaaatcgggcattggtgaatttgaccgc
gttactggcggcggccttgtgcccggttcagcgatcctgatcggtggtgatccgggtatt
ggtaaatcaaccattcttttacaatccatgagcaagcttgccgatggcggccataaaacc
gtttatatttccggcgaggaatccgtggcccaggttagaatgcgtgcgaaacgtctggga
cttgcggaaagtaatgttgaactgggatcagaaaccaatcttcgcgatatccttgccacc
ctttcaaagggcgactgcccggatgttgtggtgatcgacagtatccagaccatgtatgcg
gacaccatcgaatccgcccccggaacggtggcgcaggttcgcacatccgcgcaggaatta
atccggttcgcgaaaaagaaaaatgtatgcgttcttctggtcgggcatgtcaccaaagac
ggacaaattgctggcccacgcgtgatggaacatatggttgataccgttctttatttcgaa
ggggatcgcggccatcaattcagaattttacgcgcggtgaaaaaccgtttcggtggcact
gatgaaatcggtgtctttgaaatgggtgaactggggctgtccgaagtatcaaacccgtct
gcattattccttggggaccgtgacggtgatgtggttggttccgccgtatttgcgggcatg
gaagggtcacgcccaatgcttgttgaggtacaagcacttgtggcgcaaagttcccttggc
acacctcgccgcgctgttgttgggtgggatagcgcgcgtcttgcgatgattatcgctgtg
cttgatgccagatgtggtcttgggcttggggcctttgatatttatttaaatgtggcgggc
ggccttaaaatttcagaaccagcagccgaccttgcggttgcggcggcgcttatatcatca
ttatccggtgacccgatcgccgaagaaacggttatttttggtgaaatcgcgctgtccggg
gaaatcagaccagtcggacaagcggacgccagattaaaagaagcggaaaagcttggcttt
acccaagcctttattccgtcaaaaatgaagtttaaaaataagaaaataaaaacagccgag
cttgaccaactgatcaaacttgtggatataatcgcaccaaatcttggtgaataa
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