Pseudemcibacter aquimaris: KW060_12040
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Entry
KW060_12040 CDS
T08836
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi00071
Fatty acid degradation
paqi00280
Valine, leucine and isoleucine degradation
paqi00310
Lysine degradation
paqi00362
Benzoate degradation
paqi00380
Tryptophan metabolism
paqi00410
beta-Alanine metabolism
paqi00640
Propanoate metabolism
paqi00650
Butanoate metabolism
paqi00907
Pinene, camphor and geraniol degradation
paqi00930
Caprolactam degradation
paqi01100
Metabolic pathways
paqi01110
Biosynthesis of secondary metabolites
paqi01120
Microbial metabolism in diverse environments
paqi01200
Carbon metabolism
paqi01212
Fatty acid metabolism
Module
paqi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KW060_12040 (fadB)
00650 Butanoate metabolism
KW060_12040 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KW060_12040 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KW060_12040 (fadB)
00310 Lysine degradation
KW060_12040 (fadB)
00380 Tryptophan metabolism
KW060_12040 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KW060_12040 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KW060_12040 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KW060_12040 (fadB)
00930 Caprolactam degradation
KW060_12040 (fadB)
Enzymes [BR:
paqi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KW060_12040 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KW060_12040 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KW060_12040 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KW060_12040 (fadB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WDU57923
LinkDB
All DBs
Position
complement(2548477..2550642)
Genome browser
AA seq
721 aa
AA seq
DB search
MLPQGQFIQVKDAGNDIYEIVFDRKDDKINKFDQAALEELRDTVAAVAKIEGIKGAVFTS
AKDTFIVGADITEFIQMFSHTEEEVYDHILKHHDYFNAVEDLPCPTVTAINGIAVGGGME
LCLATDYRIMTPDAKIGLPEVKLGLNPGWGGTVRLPRLIGVDNANEWICAGGNNDAEKAL
KEGAVDAVVEKDQLLSSAIDLINKCNAGDFDYQARRTEKQTPVKLNHVEHMMAFESAKGV
IAGKAGPHYPAPMQALKTMKKSVTMDRAGAIEQEVRGFAKLAKTDVCTSLVSLFLNDQIV
KRVSKKYTKNAEPVNMAAVLGAGIMGGGVAYQSASKGTPILMKDINEDALQLGLDEAVKL
LSGQLKRGRIDTAKMAKTLTQITPTLSYGDFGRADIVVEAVVENEKIKKAVLAETEENMK
DGAILTSNTSTISITELATALKKPEKFCGMHFFNPVHRMPLVEVIRGEKTGEEAIAQTVA
YAQRMGKTPIVVNDCPGFFVNRVLFPYFGGFSSLVSEGADFKQVDKVMEGFGWPMGPAYL
LDVVGIDTAYHADAVMADGFPDRMTHEGKNAVDLMFELERFGQKNKKGFYKYELDKRGKD
KKIIDEDVPGLLSDVTGDIKEFDDQEIIERMMLPLLIEVARCVEEGIVASAAEADMALIY
GIGFPPFRGGALHYMDQVGMDNILAMAAKYEHLGPLYHPTDRMKEMAANKEKYHQAEGDK
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgcaagggcaatttatccaagtgaaggacgccggaaacgatatttatgaaatc
gtttttgaccgcaaagacgataaaatcaataaatttgatcaggctgcactcgaagaatta
cgagataccgttgcggcagtcgccaaaatcgaaggcattaaaggggcggttttcacaagc
gcgaaagatacattcattgttggtgctgatattactgaattcattcaaatgttctctcat
acggaagaagaggtctatgaccatatcttaaaacatcatgattattttaatgcggtagaa
gacctgccatgtccgacggttacggccattaacggcattgctgttggtgggggcatggaa
ttatgtcttgcgaccgattaccgtattatgaccccggacgcaaaaatcggattaccggaa
gtaaagcttggccttaaccctggttggggtggcacggttagactgccgcgattaatcggt
gttgataacgccaatgaatggatttgcgcgggcggcaataatgacgcggaaaaagcatta
aaagaaggcgctgttgacgcagtggtggaaaaggaccaattactatcaagtgccattgat
ctcattaacaagtgtaacgcgggtgattttgattatcaggcaagacgcacggaaaaacaa
acgcccgtgaagcttaatcacgttgaacatatgatggcgttcgaaagcgcgaaaggtgtc
atcgccggaaaggcagggccacattacccggcaccgatgcaagccttaaaaaccatgaaa
aaatccgtgaccatggaccgtgccggcgcgattgagcaagaagtacgcggcttcgcaaaa
cttgctaaaaccgatgtctgtacgtcacttgttagcctgtttttaaatgatcagatcgtg
aaacgcgtttccaaaaaatacacgaaaaacgcagaacctgtgaatatggcagccgtactt
ggtgcgggtatcatgggcggtggtgttgcctatcagtcggcatcaaaaggcacgccgata
ttgatgaaagacatcaacgaagatgcattacagcttgggcttgatgaagcggtgaaatta
ttaagcggtcaattaaaacgcggccgcattgatacggcgaaaatggcaaagacattaacg
cagatcacaccgaccttaagttacggcgattttggccgtgctgatattgtggttgaagcc
gtcgtcgaaaatgaaaagatcaaaaaagccgtccttgctgaaacagaagaaaatatgaaa
gatggtgcgatcctaacgtcaaatacatcaaccatctccattacggaactggccacggcg
ttaaagaaaccggaaaaattctgcggtatgcatttctttaaccccgtgcaccgcatgcca
ctggttgaggtcatccgcggtgaaaaaacaggtgaagaggcgatcgctcagacggtcgca
tacgcacaacgaatgggtaaaacaccgattgtggtgaatgattgcccgggctttttcgtg
aaccgcgtgttgttcccttactttggcgggttttcctcgttggtcagcgaaggggccgat
ttcaaacaagtggataaagtgatggaagggttcggctggccaatggggcctgcatacctg
cttgatgtagtggggattgatactgcctatcacgcggatgcggtaatggccgatggtttc
ccggaccgtatgacccatgaaggaaaaaatgccgttgatctgatgtttgaactggaacgg
tttggtcagaaaaacaaaaaaggcttctataaatacgaactggataaacgcggcaaagat
aaaaagatcatcgatgaagatgtccctggattattgagcgatgtaaccggtgatattaaa
gaatttgacgatcaagaaatcattgaacgcatgatgttgccgttactgatcgaggtcgca
agatgcgttgaagaaggcattgtcgccagcgcggcagaggccgacatggcgcttatttac
ggtatcggttttccaccattcaggggtggtgcgctacattatatggatcaggtcgggatg
gataacatcctcgccatggccgctaaatacgaacatttagggccgctttatcatccgacc
gaccgaatgaaggaaatggcggcaaataaagaaaaataccaccaagcagaaggagacaaa
tcatga
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