Pseudemcibacter aquimaris: KW060_14595
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Entry
KW060_14595 CDS
T08836
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KW060_14595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqi03400
]
KW060_14595
Enzymes [BR:
paqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KW060_14595
DNA repair and recombination proteins [BR:
paqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KW060_14595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_16
ADDB_N
PIF1
Flavi_DEAD
GpA_ATPase
Glycos_transf_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WDU58419
LinkDB
All DBs
Position
complement(3104207..3106393)
Genome browser
AA seq
728 aa
AA seq
DB search
MSDFFSHCRIQVLLPLPLGGVLDYLLPDGMDVGPGDFVTVPLSGREMQGVVWNTQPEDSD
VPLEKLKHIIRTSELPALPESLIKFVDWVAHYTLSPPGAVLKMALSVPRKSENPKKKTLY
KLSPDLPDKLTPARQKIVGAAIDDMPMAVKTWTEIAAVGEGVVRGMIKTGMLIPVEVSGE
ETFAVPDIEIERATLSGEQQEAAKHIITQQRSETFRAILLEGVTGSGKTEVYFEAIAESL
KEKTAQVLVLVPEISLTTQWLERFKERFGTEPVIWHSEMTPAQRRRAWWATIRGEARVIV
GARSALFLPLQNLKLVIVDEEHSQTFKQDEGVMYHGRDMAVVRAMQSHCPVVLASATPSL
ETMINAENAKYDWLYLGERHGPATLPSMSTVDLRVHKLKTGSWISAPLYQALKENLENGE
QSLLYLNRRGYAPLTLCRKCGHRFECPHCSAWLVEHHKWQRLECHHCGFNRRVPDQCPNC
EAEDSLVPCGPGVERVAEEVADLFPEARLAILSSDEISSPSALKRMIESIERHEVDFIIG
TQIVTKGYHFPMLTLVGVIDADLGMSGADPRAAERTWQQLEQVAGRAGRAEHPGRVIFQT
YEPGHPVLSALVSGDKDLFLEREAESREAQNLPPYGKLASLILSGPDKGKVMDTAKRLSK
IAPHYDNVTVLGPVPAPLAYLRGNHRYRFLMKAEGRVNIQKVIHDWLAGLPKHGGVRVQV
DIDPYSFY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagattttttctcacattgccgtattcaggtgttattgccgctgccgcttggcggg
gtgcttgattatctgttgccggatggcatggatgtggggccgggcgattttgtaaccgtg
ccgttatcgggccgtgaaatgcagggcgtggtctggaatacccaaccggaagacagcgat
gtaccacttgaaaaattaaaacatatcattcgcacttctgaattgccggcgttgccggaa
agtttgattaaatttgtcgattgggttgcgcattatacgctttcgccgccgggtgccgtt
ttaaaaatggcattaagcgtgccaagaaaatcagaaaatccaaagaaaaaaacgctatat
aaattatcgcctgatctgccggataaattgacacccgcacgtcaaaaaatcgtgggtgcc
gcgatcgacgatatgccaatggcagtaaaaacatggacagagatcgccgcggtcggcgaa
ggggtcgtgcgcggtatgatcaagacgggaatgttaatcccggttgaggtcagcggcgaa
gaaacattcgcagtcccagatattgaaatcgaacgcgcaacgctttcgggtgaacagcaa
gaagccgccaagcacattattacacaacaacgcagtgaaacattccgcgctattttgtta
gagggcgtaacaggcagcggtaaaacggaagtatattttgaggcaatcgcggaaagctta
aaagaaaagacggcgcaagtgttggttttggtgccggaaatatcgctgacgacacagtgg
ctagaacgatttaaggaacggtttggcaccgaacccgttatttggcattcggaaatgaca
ccggcacaaagacggcgcgcatggtgggcgacaatccgtggtgaagcgcgggttatcgtt
ggtgcgcggtcggcgttattcctgccccttcagaatttgaaactcgtgatcgttgatgag
gaacattcccagacattcaagcaagacgagggcgtcatgtatcatggccgtgatatggcg
gtggtacgggcgatgcaatcgcactgccccgtggtgcttgcgtcggcgacaccgtcgctt
gaaaccatgattaatgcggaaaatgccaaatatgattggctttatcttggcgaacgacac
ggtcccgcgacgcttccaagtatgtcgacggtggaccttcgtgttcataaattaaaaacc
ggcagctggatcagcgcacccctttatcaggccctaaaagaaaatctggaaaatggtgaa
cagtcgcttttatatctaaaccgccgtggatatgcgccactcacattatgtaggaaatgc
gggcatagatttgaatgcccccattgttcagcgtggcttgtggaacatcataaatggcag
cgtcttgaatgccatcattgtggctttaatcgccgtgtgccggaccaatgcccgaattgt
gaggcagaagacagtcttgtgccatgcggtcccggtgttgaacgtgtcgcggaggaagtc
gccgacctgttccctgaagcgaggctcgcgatcctttctagtgatgaaatttcatcaccc
agtgcattaaaacggatgattgaaagcatcgaacgacatgaggtcgattttatcatcggc
acacagatcgtgaccaaaggatatcattttcctatgttgacgctcgttggtgttattgat
gctgatcttggcatgtcgggcgcagacccacgcgcggcggaacgtacatggcaacaatta
gaacaagtggcgggacgcgcgggaagggccgaacatccgggccgtgtgatttttcaaacc
tatgaacccggccatccggtcttatcggcactggtgagtggcgataaggatctgtttctt
gaacgagaggcagaatcacgtgaagcacagaacttgccgccttacgggaaattagcatca
ctgatattatccggcccagataagggtaaagtgatggataccgccaaacggttatcaaaa
attgccccgcattatgataatgttaccgtacttggccctgtgccagcaccactggcgtac
ttgcgtggtaatcaccgttatagatttcttatgaaagcggaaggtcgggtcaatattcaa
aaagtgatccacgactggctagcgggacttccaaaacatggtggtgttcgggttcaggtg
gacatcgatccatacagtttttattag
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