KEGG   Pseudemcibacter aquimaris: KW060_14660
Entry
KW060_14660       CDS       T08836                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
paqi  Pseudemcibacter aquimaris
Pathway
paqi00010  Glycolysis / Gluconeogenesis
paqi00020  Citrate cycle (TCA cycle)
paqi00260  Glycine, serine and threonine metabolism
paqi00280  Valine, leucine and isoleucine degradation
paqi00310  Lysine degradation
paqi00380  Tryptophan metabolism
paqi00620  Pyruvate metabolism
paqi00630  Glyoxylate and dicarboxylate metabolism
paqi00640  Propanoate metabolism
paqi00670  One carbon pool by folate
paqi00785  Lipoic acid metabolism
paqi01100  Metabolic pathways
paqi01110  Biosynthesis of secondary metabolites
paqi01120  Microbial metabolism in diverse environments
paqi01200  Carbon metabolism
paqi01210  2-Oxocarboxylic acid metabolism
paqi01240  Biosynthesis of cofactors
Module
paqi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
paqi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
paqi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
paqi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:paqi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KW060_14660 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KW060_14660 (lpdA)
   00620 Pyruvate metabolism
    KW060_14660 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KW060_14660 (lpdA)
   00640 Propanoate metabolism
    KW060_14660 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KW060_14660 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KW060_14660 (lpdA)
   00310 Lysine degradation
    KW060_14660 (lpdA)
   00380 Tryptophan metabolism
    KW060_14660 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KW060_14660 (lpdA)
   00670 One carbon pool by folate
    KW060_14660 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paqi04147]
    KW060_14660 (lpdA)
Enzymes [BR:paqi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KW060_14660 (lpdA)
Exosome [BR:paqi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KW060_14660 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 HI0933_like GIDA AlaDh_PNT_C NAD_binding_8 DAO FAD_binding_3 Lys_Orn_oxgnase Thi4 Amino_oxidase 3HCDH_N Mqo DUF4857 Lycopene_cycl
Other DBs
NCBI-ProteinID: WDU58432
LinkDB
Position
complement(3118062..3119468)
AA seq 468 aa
MSDNYDVVVIGGGPGGYVAAIRAAQLGLKTACVEMRGSLGGTCLNVGCIPSKALLHASEL
YDEANGGMEKFGISTGKVSIDVSKLMDHKDGIVTDLTNGIEFLFKKNKVDYVKGRGKVAG
AGKVEVALNDGGEQVLETKNIVIATGSDVASLPGIEIDEKIVVSSTGALSLPKVPKHMVV
IGGGVIGLELGSVWKRLGADVTVVEFMDRITPEMDGEVSKTFARILKKQGFKFKLKSKVT
AIKTTKTGATVSVEPAKGGDADTIKADAVLVAVGRRPYTEGLGLAEAGVNVNDRGQVDIN
DHFETNVPGVYAIGDVVRGAMLAHKAEDEGVAVAEIIAGYAGHVNYDAIPGVIYTMPEVA
SVGKTEEQLKEAGTDYNSGKFPFTANSRAKANSQTDGFVKVLSCATTDKVLGAHIIGADA
GNMIAELTLAIEKGITAEDVAYTCHAHPTETEAVKEAAMAAGGSPIHM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgagcgataattatgatgtagtcgtaatcggcggcggaccaggtggttacgttgctgcg
attagagcagcccaactgggcttaaaaacagcatgtgttgaaatgcgtggttcacttggt
ggaacgtgtttgaatgttggctgtatcccgtcaaaagcacttcttcatgcgtcagaactt
tatgacgaagcaaacggcggcatggaaaagtttggtatttcaactggtaaagtttccatc
gatgtttcaaaattaatggatcataaagacggtattgtaacggatcttacaaacggtatt
gaatttttatttaagaaaaacaaggtcgattatgtaaagggtcgcggtaaagtcgcgggc
gctggcaaggttgaagttgcactaaacgatggcggtgaacaagttcttgagacaaaaaat
atcgttatcgcaacgggttctgatgtggcgagccttccgggtattgaaattgatgagaaa
atcgttgtgtcttcaacgggtgcattaagccttccaaaagtgccaaaacatatggttgtt
attggtggtggcgtgatcgggcttgagcttggttccgtatggaaacgccttggtgctgat
gtgacggttgttgaatttatggaccgtattacccctgaaatggacggcgaagtttcaaaa
actttcgcacgtattctgaaaaaacaaggctttaaatttaaactgaaatcaaaagtaaca
gcgatcaagacaacgaaaacgggcgcaaccgtttctgttgagccggcaaaaggtggtgac
gctgatacaattaaggctgacgcggttcttgtggctgttggtcgtcgtccttatacagag
ggacttggtcttgctgaagctggcgttaacgtgaatgatcgtggtcaggttgatatcaat
gatcatttcgaaaccaatgtaccgggcgtatatgcgattggtgatgtggtgcgcggcgca
atgcttgcccataaagcagaagacgaaggcgttgccgtcgcggaaattatcgcgggttac
gcgggtcacgtgaattatgatgcaatcccaggcgtgatttacacaatgccggaagtggca
tctgtgggtaaaacagaagaacagcttaaagaagcgggtaccgattacaattccggtaaa
ttcccgttcacagcgaacagccgtgcaaaagcaaacagccaaaccgacggttttgtgaag
gttctatcttgcgctacaactgataaagtgcttggcgcccatatcattggggcggatgcg
ggtaatatgatcgctgaacttacacttgccattgaaaaaggcatcacagccgaggacgtg
gcatatacatgtcatgcccatccaacggaaacagaagccgttaaagaagcggcaatggcc
gctggtggttcaccaattcatatgtaa

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