Pseudemcibacter aquimaris: KW060_14890
Help
Entry
KW060_14890 CDS
T08836
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
paqi
Pseudemcibacter aquimaris
Pathway
paqi00300
Lysine biosynthesis
paqi00470
D-Amino acid metabolism
paqi01100
Metabolic pathways
paqi01110
Biosynthesis of secondary metabolites
paqi01120
Microbial metabolism in diverse environments
paqi01230
Biosynthesis of amino acids
Module
paqi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KW060_14890 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KW060_14890 (dapF)
Enzymes [BR:
paqi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KW060_14890 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WDU58476
LinkDB
All DBs
Position
complement(3168089..3168892)
Genome browser
AA seq
267 aa
AA seq
DB search
MQGLKNHFAIVDGRNDPFKPTAEEIIQICDPRTGVGAEQLLVIEPVTEAGAGAYARVRIY
NPDGPEVEACGNATRCIARLFFDETGLDEIDVEINFEVLHCERDGDNYSVEMGKISDQWD
KIPLAKECDTLHVDISDEGVSDGVAINVANPHLVYFVDDFDSVDLAAVGARIQKHPMLPE
SANVGLAEILDEDNIKFQVYERPGVLTQACGSGSCAVVAAAFKRGLIKTPSANVHMPGGS
LKISYKDAVSPVMSGPAEYCYSGFLKR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggcttaaaaatcattttgccatcgttgatggccgcaatgatccttttaagccc
acagctgaagaaattatccaaatatgtgatccacgcacgggagtgggggcagaacagttg
ctggttattgagccagtaaccgaagcaggtgcgggcgcatatgcccgtgttcgtatttat
aatccggacgggccagaggttgaagcctgcggtaatgcaacccgatgtatcgcacggctc
ttttttgacgaaactggccttgatgaaattgacgtagaaattaatttcgaagtgcttcat
tgcgaacgcgatggtgataattacagcgtagaaatgggcaaaatttcggatcagtgggat
aaaattccgctcgccaaagaatgtgatacccttcatgtggatatttctgatgagggggta
tcggacggtgttgccattaatgtggcgaatcctcatcttgtttatttcgttgatgatttt
gatagtgttgatctggcggcggttggggcacgcatccaaaagcatccaatgcttccagaa
tcagccaatgtgggccttgctgaaatattggatgaagataatatcaagtttcaggtttat
gaaagaccaggtgtattgacgcaagcctgcggcagtgggtcctgcgccgtggttgcagcg
gcctttaaacgcggattgattaaaaccccatcggcaaatgttcatatgccgggcggtagt
ttaaaaatttcttataaagatgcggtatcgcccgttatgtctggaccagcagaatattgc
tatagcggatttttaaaaagatag
DBGET
integrated database retrieval system