Pseudemcibacter aquimaris: KW060_15735
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Entry
KW060_15735 CDS
T08836
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
paqi
Pseudemcibacter aquimaris
Brite
KEGG Orthology (KO) [BR:
paqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqi03021
]
KW060_15735 (nusA)
03009 Ribosome biogenesis [BR:
paqi03009
]
KW060_15735 (nusA)
Transcription machinery [BR:
paqi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KW060_15735 (nusA)
Ribosome biogenesis [BR:
paqi03009
]
Prokaryotic type
rRNA transcription factors
KW060_15735 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
HHH_5
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
WDU58633
LinkDB
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Position
3349383..3350927
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AA seq
514 aa
AA seq
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MTAVSANRLELLQISDAVAREKNIDKEIVLGAMEEAIQKAARSRYGMENEIKAHIDRKTG
DIKLYRVLEVVENVENHSTEITVADAVQFKDDPQIGDILADELPAIDFGRVAAQTAKQVI
VQKVREAERARQYNEYKDKIGEMINGVVKRVEYGNVIVDLGAAEAIIRRDQLIPREHIRN
GERVRAIIQDVREEPRGPQIFLSRSHPDFMAKLFAGEVPEIYDGVIGVVGVSRDPGSRAK
IAVTSNDPSIDPVGACVGMRGSRVQAVVEELQGEKIDIIQWSPDPATYIIRALAPANVTK
VVIDEDAGRMDVVVGEDQLSLAIGRRGQNVRLASQLTEWQVDIMTEADESERRQAEYKER
SELFMNQLDVDETLALLLVGEGFRNLEEVAYVAPDEFAGIEGFDMALVEELQNRAREAIA
NIVEVAESKRVELGVTDELAAIEGLTAPMLVTLGEADIKTLDDLGDLAGDELTSQEDGIL
RGYDLSLDQANEMIMAARAHWFDDEEETSEAAEE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtaagtgcaaatagattggagcttttacagatttctgatgcggtagcgcgt
gagaaaaatatcgacaaggaaatcgtccttggtgccatggaagaggcgatccagaaagcg
gcccgctctcgctatggtatggaaaacgaaattaaagctcatattgatcgcaagactggc
gatatcaagctttaccgtgtgcttgaagtggtggaaaatgtagaaaaccattctactgag
atcactgttgcggatgcggttcaatttaaagacgatccgcaaattggtgatattcttgcg
gatgaacttcctgcgattgattttggtcgtgttgctgcacaaacggcaaaacaagttatc
gtgcaaaaagtacgcgaagccgaacgtgcccgtcagtataacgaatataaagacaagatc
ggtgaaatgatcaacggcgttgtaaagcgtgttgaatacggcaatgtgattgttgacctt
ggtgctgctgaagcgattatccgtcgtgaccagcttatcccacgtgaacatatccgtaac
ggtgaacgtgttcgtgcaattattcaggacgtgcgtgaagagccacgcggcccacagatt
ttcttatctcgttcgcaccctgatttcatggcgaaattatttgctggtgaagtaccggaa
atttatgacggtgtaattggcgttgttggtgtaagccgtgacccgggtagccgtgcgaaa
atcgcggtgacaagcaacgatccaagcattgatcctgttggtgcttgtgtcggtatgcgc
ggtagccgcgttcaagcggttgtggaagagcttcagggcgagaaaattgacatcattcaa
tggtcgccggatcctgccacatatatcatccgtgcgcttgcgccagcgaatgtgaccaaa
gtggttattgacgaagatgccggtcgtatggatgtggttgttggtgaagatcagttaagc
cttgcgatcggtcgtcgtggtcaaaacgtgcgtcttgcatcacagctgactgaatggcaa
gtggacattatgactgaagcggatgaaagtgaacgtcgtcaggcagaatataaagagcgc
agtgaactattcatgaaccagcttgatgttgatgaaacattggcgcttctacttgttggt
gaaggtttccgtaaccttgaagaggttgcttatgtggcaccggatgaatttgccggcatc
gaaggttttgacatggcccttgtggaagagctgcaaaatcgcgcccgcgaagccatcgca
aatattgttgaagttgctgaaagcaaacgtgttgagcttggtgtaacagatgaacttgcc
gcgattgagggcttaacagcaccgatgcttgttacccttggtgaagcggatattaaaacg
cttgatgatcttggtgatctggctggtgatgagcttacaagtcaggaagatggtattctt
cgtggatatgatctttctcttgatcaggccaatgaaatgattatggcggcacgcgcccat
tggtttgatgacgaagaagagacatcagaagcggcagaagaataa
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