Candidatus Paraluminiphilus aquimaris: E0F26_00060
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Entry
E0F26_00060 CDS
T09832
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paqm03016
]
E0F26_00060 (miaB)
Enzymes [BR:
paqm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
E0F26_00060 (miaB)
Transfer RNA biogenesis [BR:
paqm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
E0F26_00060 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UZP73223
LinkDB
All DBs
Position
12451..13791
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AA seq
446 aa
AA seq
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MSTTTRSKVFIQTHGCQMNEYDSARMSDLLRESHGMERTDNAEEADVLLLNTCSIREKAQ
EKVFHQLGRWKSIKAKRPDVVIGVGGCVASQEGEAISERAPYVDLIFGPQTLHRLPEMLE
TRNEKDSAVVDISFPEIEKFDRLPQPSSDSATAFVSIMEGCSKYCTFCVVPYTRGEEVSR
PVDDVIAEIAHLASSGVKEVNLLGQNVNAYRGENHLGEIVDFAELLGLVNLVPGVERIRY
TTSHPVEFSDALIEAYRDIPALVDHLHLPVQSGSDRILMAMKRGHTAIEYKSKIRALRKI
RPNISLSSDFIIGFPGETEQDFHATMKLIEEVGFDTSFSFIYSARPGTPASDLQDETPED
VKKKRLHLLQSRINQQAMEISRRMVGTTQRILVTGVSKKDPGRLAGRTENNRVVNFTSLD
HDLIGEFATVDIVDALPNSLHGVLVS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaacaacacgatcaaaagtctttatccagacccatggttgccaaatgaacgaa
tacgactctgcgcgaatgagcgacttattgcgcgagagccacggcatggagcgaacggat
aacgcagaagaggccgatgtgcttttgctgaacacctgcagcattcgtgaaaaagcgcag
gaaaaagtatttcatcaactcggccgctggaaatcgataaaagccaagcgccccgatgtg
gtcattggtgtcggcggctgcgtcgcgagccaggagggcgaggccattagcgagcgagcg
ccctatgtcgacttaatatttggccctcagacactccatcgactgcctgagatgctcgaa
acgcgcaatgagaaagacagtgccgtagtcgatatttcgttcccggagatagaaaagttc
gatcggctacctcagccgtcaagcgacagcgcaacagcgttcgtatcgattatggaagga
tgcagtaagtactgcacattttgcgtcgtcccttacacacgaggcgaagaggtatcgcgt
ccagtggatgatgtcattgccgagattgcacacctcgcatcgtctggggtgaaagaggtc
aatctcttgggtcaaaacgttaatgcttatcgcggcgagaaccatcttggagagatcgtg
gactttgccgagctacttgggctggttaatttagtccccggtgtggagcgcattcggtat
accacgtcccaccccgtggaatttagcgacgcgttaatagaagcttaccgcgatattccc
gcgctggttgaccatcttcacctgcccgtgcaaagcggctcagatcgcattttaatggcg
atgaagcgaggccataccgcgatagaatacaagtctaagatacgcgcactgcggaagatt
cgtcctaacatatcgttatcttcagacttcatcattgggttcccaggggagacggagcaa
gatttccacgccacgatgaagctcatagaagaagtggggttcgatacatccttcagcttt
atatacagtgcaagacccggtactccagcgtctgatctgcaggacgagacaccggaggac
gttaaaaagaaacgattgcatctcctacaaagccgtatcaatcagcaagcgatggaaata
agtcggcgtatggtcggaacgactcaacggattctcgtgaccggcgtatcgaagaaagat
cctggccggctagctggacgaactgaaaacaaccgtgtggtcaactttaccagccttgac
cacgatttaatcggcgagttcgcgacagtcgatattgtcgacgcgctgccaaactcgctt
cacggcgtgcttgtgagttga
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