Candidatus Paraluminiphilus aquimaris: E0F26_00260
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Entry
E0F26_00260 CDS
T09832
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Pathway
paqm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E0F26_00260 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paqm03019
]
E0F26_00260 (pnp)
03016 Transfer RNA biogenesis [BR:
paqm03016
]
E0F26_00260 (pnp)
Enzymes [BR:
paqm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E0F26_00260 (pnp)
Messenger RNA biogenesis [BR:
paqm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E0F26_00260 (pnp)
Transfer RNA biogenesis [BR:
paqm03016
]
Prokaryotic type
tRNA degradation factors
E0F26_00260 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
SPATA25
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
UZP73262
UniProt:
A0ABY6Q2F7
LinkDB
All DBs
Position
complement(58249..60534)
Genome browser
AA seq
761 aa
AA seq
DB search
MNVVTKTFQYGGQEVTLETGRIARQASGAVMVTMGTTSVLCTVVAEQKEKPGQAFFPLSV
HYIEKAYSVGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFADGFMNEVQVVCTVMSAD
LETDPDIPAMIGTSAALAISGCPFNGPIGGARVGFTEADGYLLNPSYTALKDSKLDMVVA
GTRDAVLMVESEAKELSEDQMLGAVLFAHQELQTVIKAIDELVAEAGKPRWDWSAAEVNE
ALRAQVEEAAGGDLGEAYRITEKAARYERVGQVRDAVIEQLASDEGPSADDIKDEFKALE
KRIVRQRILAGEPRIDGRDGRTVRQIACEVDVLDNVHGSSLFTRGETQAIGAVTLGSTRD
AQIIDALEGERRDPFMLHYNFPPYSVGEAGRMGFTGRREIGHGRLARRGLAAVLPNEEQF
PYTIRVVSEITESNGSSSMASVCVGSLAMMAAGVPLKAPVAGIAMGLVKEGNQFAVLTDI
LGDEDHLGDMDFKVAGTAEGVTALQMDIKIEGINEQIMEVALEQALHARLHILGQMNSVL
DSAREITSENAPSMIALKVDSDKIRDIIGKGGATIRQITEESGATVDINDDGTVKVFGQN
QAARDAAVEMIMAITAEAEVGAVYTGKVARIVDFGAFITILPGKDGLLHISQIANERVEN
VSDYLTEGQEVTVKCLDVDQRGRIKLSIKELLEDEAPEEAPVAEAAEAAEPAAEPEVAEV
VEADVAEEAPAEDVDADEANSADDASDDASDDDGDEEEEAK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtagttacaaaaacgttccagtatggtggccaagaagtcacgctggaaactggc
cgtatcgcgcgccaggcctctggtgccgttatggtgaccatgggcacaacgtctgtgctt
tgcaccgtcgtagcagaacaaaaggaaaagcctggacaggcgtttttccctctttcggtc
cattacatcgagaaagcctattcggtaggtaaaattcccggtggtttctttaagcgtgag
gctcgacccagcgaaaaagagacgctgacatcacgattgatcgatcgtcctattcgcccc
ttgttcgccgatggattcatgaacgaggtacaggttgtctgtacagtcatgtctgccgat
ttggagacggatcccgatatccccgcgatgattggtacttcagccgccctagcgatatcg
ggttgccctttcaatggtccgattggcggtgcgcgtgttggtttcaccgaggccgacggc
tacttactcaaccctagctatacggcattgaaagatagcaagctggatatggtggtagcc
ggtacacgcgatgcggtactgatggttgaatcggaagcaaaagagctgtcggaagaccaa
atgttgggcgccgtactgtttgctcaccaagaactgcaaacggttattaaggcgatcgac
gagctcgttgcagaggcaggtaagccgcgttgggattggtcagccgctgaggttaacgaa
gcgcttcgtgcacaagttgaagaggccgctggtggagacttgggtgaggcgtaccgcatt
accgagaaagcagcgcgctacgagcgtgtcggacaggtgcgagatgccgttatcgagcaa
cttgcatcggacgaaggtccctctgcagacgatatcaaggacgagtttaaagcgctcgag
aagcgcattgttcgtcagcgtattctcgctggagagcctcgtatcgatggtcgtgatggc
cgcacggttcgtcaaatcgcttgtgaagttgacgtacttgataacgtgcacggttcgtca
ttgttcacgcgtggcgagacccaagccattggtgctgtaacgctcggatctacgcgtgat
gcacagattatcgatgcgctcgagggtgagcggcgtgatccattcatgctgcattacaac
ttccctccttattctgtaggtgaagcgggacgcatgggattcaccggacgtcgcgaaatc
ggtcacggccgcttggcacgtcgcggattggcagcagtgcttcccaacgaggagcagttc
ccttacaccattcgggttgtatcagagattaccgagtcaaacggttcgagttctatggcg
tccgtctgcgtaggttctctggcaatgatggccgcgggcgtacctttaaaggcgccggtt
gcgggtatcgccatgggtctggtgaaagaaggaaatcagtttgccgtactcaccgatatt
cttggtgacgaggatcaccttggtgatatggactttaaagtagcgggtaccgctgaaggc
gttacagcactgcaaatggatatcaagatcgaaggtatcaacgagcagatcatggaagtg
gcgcttgagcaggctctgcatgcgcgcttacacatccttggccaaatgaattcggtcctt
gattcagcgcgggaaattacgtctgaaaatgcgccaagcatgattgcgttaaaggtcgat
tccgacaagatccgcgacattattggtaagggcggtgcaaccattcgtcagatcacagaa
gagtctggcgcgacggtcgacatcaatgatgacggcactgtaaaagtctttggtcagaat
caggcggcgcgtgatgcggcggttgaaatgatcatggccatcacggctgaagctgaggtg
ggcgctgtttacacaggtaaggttgcgcgcatcgttgattttggtgcgttcattacgatc
cttccgggtaaagacggcttgttgcacatttctcaaatcgcaaatgagcgtgttgaaaat
gtgagcgattacctcactgaaggtcaagaagtgacggttaagtgtcttgacgttgatcaa
cgtggtcgtatcaagctctctatcaaagagctgctcgaagatgaagcgcccgaggaagca
ccggtagcggaagcagcagaggctgccgagccggctgctgagccagaggtagctgaggtt
gttgaagctgacgtcgctgaggaagcgcctgcagaggacgtagatgccgatgaagcgaat
agcgctgatgacgcatcagatgacgcatctgatgatgatggtgatgaggaagaggaagct
aagtaa
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