Candidatus Paraluminiphilus aquimaris: E0F26_00870
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Entry
E0F26_00870 CDS
T09832
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Pathway
paqm00300
Lysine biosynthesis
paqm00470
D-Amino acid metabolism
paqm01100
Metabolic pathways
paqm01110
Biosynthesis of secondary metabolites
paqm01120
Microbial metabolism in diverse environments
paqm01230
Biosynthesis of amino acids
Module
paqm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E0F26_00870 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E0F26_00870 (lysA)
Enzymes [BR:
paqm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E0F26_00870 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UZP73373
LinkDB
All DBs
Position
182749..184026
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AA seq
425 aa
AA seq
DB search
MSSDLNLPNGFARQAGSLFCEDTQVSDLAEQFGTPLYIYSQTAITDAFLTWKQAFGDARH
LVCYAVKANSNIAILRLLASLGSGFDIVSGGELERVLTAGGDAAKVVFSGVGKSPAEIRR
ALEVGIRCFNVESSSELYLIEKIASERGDTARISIRINPDVDAKTHPYISTGLKENKFGV
NAQQALELYRYAQGASHLQPVGVDCHIGSQLTEVAPFVESVQHLRDLVLQLRKSGINIEH
IDIGGGLGIQYSDEAIPSPSELISAVRAELDPLDAELMIEPGRSIVGNAGALLTKVLVEK
AGDTKYFAVVDAAMNDLLRPALYSAWQNIVEVSVTQGSEKNTYDIVGPVCETGDFLGKER
SLSAREGDLLAVMGAGAYSFSMASNYNTRPRAAEILVHGSHTHIIRQRETLSSLWQDEQI
PEALL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagatttgaaccttcccaacggcttcgctcgccaagccggctcactgttttgt
gaagatacacaggtatctgatctagcggagcaattcggaacaccgctctatatttactcg
cagaccgcgattaccgacgcgtttctgacctggaaacaagcctttggagacgctcgccat
ctcgtttgctacgccgtcaaagcaaactcgaatattgcgattctacgactgctcgcgtca
ctgggttcgggctttgatattgtctctggaggggagttagaacgggtacttaccgcaggc
ggtgatgccgctaaagtggtgttctccggtgttgggaaatcgcccgctgaaataagacgc
gcgctcgaagtgggaatccgctgctttaatgtggaatcttcaagcgagctttacctcata
gaaaaaattgcgagcgaacgcggtgacaccgcccgtatttctattcgcatcaaccccgat
gtcgatgcgaaaacgcacccttacatctccacggggctcaaagagaataagttcggcgtc
aacgcgcaacaggctttagaactctaccggtacgcacaaggcgcctctcatcttcaaccc
gtgggtgtcgactgccatattggcagtcagctgacagaggtcgcaccgttcgtagaatcg
gttcagcaccttcgtgatctggtactccaattgcgtaaatccggcatcaatattgagcac
atcgacatcggtggaggactgggtattcagtactcagatgaagcgattccaagcccatca
gagctaatatcagccgtgcgcgccgaacttgacccgcttgatgctgaactcatgatagaa
ccaggccgatccattgtgggaaatgctggcgcactcctcaccaaggtgttggttgaaaaa
gcgggagacacaaaatattttgccgtcgtggatgcggcgatgaacgatttactcagaccc
gcgctttactccgcgtggcaaaacatcgtcgaagtatcggtgacgcaaggtagcgaaaaa
aacacctacgatatcgtcgggcccgtttgcgaaacaggcgactttctaggaaaagagcga
agtttatctgcccgcgagggcgacctacttgcggtcatgggggctggtgcctacagcttc
tctatggcgtctaattacaataccagacctcgtgctgccgaaattttagtacacggatct
cacactcatatcattcgacagcgagaaacgctgtcgtcgctctggcaggatgagcaaata
ccagaggcgctgctatga
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