Candidatus Paraluminiphilus aquimaris: E0F26_03600
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Entry
E0F26_03600 CDS
T09832
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Pathway
paqm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E0F26_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paqm03400
]
E0F26_03600
Enzymes [BR:
paqm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0F26_03600
DNA repair and recombination proteins [BR:
paqm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E0F26_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
DUF6723
Motif
Other DBs
NCBI-ProteinID:
UZP73883
UniProt:
A0ABY6Q4K0
LinkDB
All DBs
Position
complement(783931..786129)
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AA seq
732 aa
AA seq
DB search
MIPEPNANSSLIVWEIAVPAPLHTTFEYLPHDNIAPPEVGARVLVPFSGRESVGFFIQSR
EATLADPQKLKRVIDVLDHQSLIEPALLTLLRWVADYYLIPTGDALMMGLARNERKGKPS
WTAPLNALKAVASLEDARIALSRAPQQLRALELIGNKIRTLKDIESQGISKATLRALTQT
SFVEKVVNDTTHHTEKGYTPPLTPDQADITNSVADSLSSFTTHLIDGVTGSGKTAIYIEC
IKRVIDTGQQVLVLVPEIGLTPQTRSRFESALGLQVPVIHSGVSDTERSRAWAMARSGAA
PVILGTRSSVFCSFKSLGLIIVDEEHDSSLKQQDHPRYSARDVAVKRGQVCNCPVVLGSA
TPSLETLANALNHRYHHHRLTERAAAAKLPDIKLVDTRGLALTAGLSDEAISAIETTIAR
GEQALLFLNKRGFARSIQCEDCGWIAECHNCDSIMAVHKSPPQLRCHHCLAHRPTPRSCG
SCNSVRLTSRGVGTEQLETFLSRKMRQTPLFRVDSDSVPNLTALNALLDNIRQTPSAILL
GTQMLSKGHHFPRVTCVVIVDSDGLLFSADFRAEERLLQLLTQVSGRSGRAELPGQVLIQ
TRSPNHPLIKHAATTPYLELARTLLDQRRALGLPPHGALGVIRADAKQERDAIEFLNQTR
EVLADDAICRLLGPMPALMTRRAGLFRYHIVVHSQSRKRVHQTLKKAINVGSNLKIGRKI
SWFVEIDPTEIV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgataccagagcctaatgccaattcaagtcttatcgtgtgggagattgctgttccagcg
ccccttcacacgacctttgagtatctacctcatgacaatatcgcgccaccagaggtcggg
gctcgcgtgcttgtacccttttcaggccgagagtccgtggggttttttattcagtcacga
gaggcaacgcttgctgatccgcaaaagttaaagcgggtgattgacgtccttgaccatcaa
agtttgatcgaacctgcactactcacacttttaagatgggtggcggactactacctgata
cctaccggtgatgcgctgatgatgggtctggcccgaaacgaacgaaagggtaaaccttcg
tggaccgcaccgcttaacgcattaaaagcggttgccagcttggaggatgcgcgtatcgct
ctctcgcgtgcaccccagcaattacgggcacttgaacttatcgggaacaaaatccgcacc
ttgaaagacatcgagtcacagggcatatcaaaggcgacccttagagcattaacccaaacc
tccttcgtcgagaaagtggttaacgacacgactcaccatacggaaaagggttacacaccc
ccccttacccccgaccaagccgacattactaacagcgtcgctgactcattgtcgtcgttc
acgacgcacctcatcgatggtgttacaggcagcggaaagacagccatctacatcgagtgc
atcaagcgcgttatcgacaccggtcaacaagtactggtcttggtgcccgaaattggccta
acgcctcaaacacgatcgcgctttgaatcggcattggggttgcaggtgcccgttattcac
tccggcgtctccgatacagagcgcagtcgggcctgggcaatggcgcgttcaggggctgca
cccgttatcttgggcacacgctcaagcgtgttttgtagctttaaatcactcggtctgatt
attgtcgacgaagagcacgacagctcgctaaagcaacaagatcaccctcgctattcagcc
cgcgacgttgcggtcaagcgggggcaggtttgtaactgtccagtcgttttaggtagcgcg
acccccagtttagaaacactcgccaacgccctaaatcatcgctaccaccaccaccggcta
actgagagagccgccgcagcaaaactacccgacattaaacttgttgatacccgtggtctg
gccctaacagcgggccttagcgacgaagccataagcgcaatcgaaacaaccatcgcgcgg
ggggagcaggcacttttattcctcaataaacgcggatttgcgcgctctattcagtgtgag
gactgcggatggatagcggagtgtcataactgcgacagcataatggctgtacacaaatcg
ccgccgcagcttcggtgtcatcactgcctagctcatcgcccaacgccccgatcctgcggc
agttgcaacagcgttcgcctcaccagtcgaggtgtgggtaccgagcagcttgagaccttt
ttaagccgcaaaatgcgtcaaacaccgctatttcgcgtcgacagcgacagtgtcccgaac
ctaaccgcgctcaatgcactgctggataatattcggcaaacgccgtccgcaattctcctt
gggacacagatgctctccaaaggtcatcatttcccgcgggtcacctgtgttgtgattgtc
gattctgatgggctgctattcagcgctgacttccgtgcagaggagagactcttacaatta
cttacacaagtttcagggcggtcgggacgtgcagaactcccaggacaggtcttgattcag
actcgaagccctaatcatccgctgatcaagcatgccgcaaccaccccttacttagagctt
gcccgcacattgctagatcagaggcgcgcactgggactcccaccgcacggcgcgctaggt
gttattcgtgccgacgccaaacaggaacgcgatgccatcgagttcctcaatcaaacacga
gaggtgctcgcggacgatgccatttgccgcctccttggaccgatgcctgcacttatgact
cgacgcgcgggtttgtttcgctaccacattgttgtgcacagccaatcgcgcaagagggtt
caccaaaccttaaagaaggccattaatgtgggctcaaaccttaaaataggtcgaaaaata
agttggtttgtcgaaatcgacccgactgaaatcgtgtaa
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