Candidatus Paraluminiphilus aquimaris: E0F26_04885
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Entry
E0F26_04885 CDS
T09832
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
paqm
Candidatus Paraluminiphilus aquimaris
Pathway
paqm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paqm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E0F26_04885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paqm03021
]
E0F26_04885
03400 DNA repair and recombination proteins [BR:
paqm03400
]
E0F26_04885
Enzymes [BR:
paqm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E0F26_04885
Transcription machinery [BR:
paqm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E0F26_04885
DNA repair and recombination proteins [BR:
paqm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E0F26_04885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UZP74115
UniProt:
A0ABY6Q535
LinkDB
All DBs
Position
1037302..1038306
Genome browser
AA seq
334 aa
AA seq
DB search
MQNSVNEFLTPRVIKVDEKSTTRALVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
MDGVLHEYSAIEGVQEDVIEILLNLKGVALVMNGKDEAELTLSASGAGVVTAGDIQVDHD
IEIRNPEHVICTVTGDQPLMIRVVAQRGRGYSPADSRVDTDDETRSIGRLQLDASFSPIR
RVSYVVDSARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDLEGQTQAA
AAEAADEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLKDDERLLSV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattcagtaaatgagtttcttacgccacgcgttatcaaggtagatgaaaagtct
acaacgcgtgcacttgtcacacttgagcctcttgagcgtggttttggtcacacgcttggt
aatgcattacgacgcatccttctgtcgtcaatgccaggctgtgctgtgaccgaagttgaa
atggacggtgtgctgcacgagtactcggcgatcgagggcgtgcaggaagatgttatcgaa
atactgctcaaccttaagggtgttgcgctggtaatgaacggcaaggacgaggcggagctc
acgctcagcgcgtcaggtgcgggcgttgtcacagcaggtgatatccaagttgaccacgat
atcgaaatccgtaaccccgagcatgtgatctgcaccgttacgggcgaccagccccttatg
attcgtgtggttgcgcagcgtggtcggggctattcgccagcagactctcgcgttgacacc
gacgatgagacacgctcgattggtcgccttcagttagatgcgtcgttctcaccgatccgt
cgtgtgagctacgtcgttgactctgctcgagtagagcagcgcactgatctcgacaagctc
gttattgatcttgagaccaacggcactatcgatcctgaagaagccattcgtcgtgcggcg
acgattctgcagcagcaactcgctgtgtttgttgacctcgaagggcagactcaagcagct
gcggctgaagcggctgacgaagttgatccgattttgttgcgcccggttgatgacttagag
ctaacggtccgttcggcgaactgcctgaaggcggagaacatctactacattggtgatctg
gttcagcgaaccgaggttgagcttctcaagacccctaacctgggtaagaagtcgctgacc
gagattaaagacgtactcgcatcgcggggattgtctttgggtatgcgcctggagaactgg
ccacccgccagcttgaaagacgacgagcgtctactcagcgtttaa
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